• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

血红素加氧酶与不稳定反应中间产物胆绿素复合物的晶体学研究。

Crystallographic studies of heme oxygenase complexed with an unstable reaction intermediate, verdoheme.

机构信息

Frontier Research Center for Applied Atomic Sciences, Ibaraki University, Tokai, Naka, Ibaraki 319-1106, Japan.

出版信息

J Inorg Biochem. 2012 Aug;113:102-9. doi: 10.1016/j.jinorgbio.2012.04.012. Epub 2012 Apr 27.

DOI:10.1016/j.jinorgbio.2012.04.012
PMID:22673156
Abstract

This article discusses the accuracy of X-ray structural studies of heme oxygenase (HO) in complex with an unstable intermediate, verdoheme. Heme degradation by HO proceeds through three successive steps of O(2) activation. The mechanism of the third step, the ring opening of verdoheme, has been the least understood. Recent structural studies of the verdoheme-HO complex provide detailed information concerning this mechanism. Due to X-ray-induced photoreduction and the instability of verdoheme, it has been difficult to obtain an accurate structure for the ferrous verdoheme-HO complex. Therefore, accurate structural studies, including analysis of the electronic state of the verdoheme-HO complex, are needed to elucidate the proper reaction mechanism.

摘要

本文讨论了血红素加氧酶(HO)与不稳定中间产物胆绿素复合物的 X 射线结构研究的准确性。HO 通过三个连续的 O(2)激活步骤进行血红素降解。第三步,即胆绿素的开环反应,是理解最少的步骤。最近胆绿素-HO 复合物的结构研究提供了有关该机制的详细信息。由于 X 射线诱导的光还原和胆绿素的不稳定性,很难获得亚铁胆绿素-HO 复合物的准确结构。因此,需要进行准确的结构研究,包括胆绿素-HO 复合物电子态的分析,以阐明正确的反应机制。

相似文献

1
Crystallographic studies of heme oxygenase complexed with an unstable reaction intermediate, verdoheme.血红素加氧酶与不稳定反应中间产物胆绿素复合物的晶体学研究。
J Inorg Biochem. 2012 Aug;113:102-9. doi: 10.1016/j.jinorgbio.2012.04.012. Epub 2012 Apr 27.
2
Enzymatic ring-opening mechanism of verdoheme by the heme oxygenase: a combined X-ray crystallography and QM/MM study.血红素加氧酶催化verd heme 开环反应的机制:X 射线晶体学和QM/MM 研究的结合。
J Am Chem Soc. 2010 Sep 22;132(37):12960-70. doi: 10.1021/ja104674q.
3
Alkyl peroxides reveal the ring opening mechanism of verdoheme catalyzed by heme oxygenase.烷基过氧化物揭示了血红素加氧酶催化的胆绿素血红素的开环机制。
J Am Chem Soc. 2008 Apr 2;130(13):4220-1. doi: 10.1021/ja710495z. Epub 2008 Mar 11.
4
Crystal structures of ferrous and ferrous-NO forms of verdoheme in a complex with human heme oxygenase-1: catalytic implications for heme cleavage.与人类血红素加氧酶-1复合的亚铁血红素和亚铁-一氧化氮血红素形式的晶体结构:对血红素裂解的催化意义。
J Inorg Biochem. 2004 Nov;98(11):1686-95. doi: 10.1016/j.jinorgbio.2004.07.004.
5
Electrochemical reduction of ferrous alpha-verdoheme in complex with heme oxygenase-1.亚铁α-胆绿素与血红素加氧酶-1复合物的电化学还原。
J Inorg Biochem. 2007 Oct;101(10):1394-9. doi: 10.1016/j.jinorgbio.2007.05.016. Epub 2007 Jun 12.
6
Heme oxygenase reveals its strategy for catalyzing three successive oxygenation reactions.血红素加氧酶揭示了其催化三个连续氧合反应的策略。
Acc Chem Res. 2010 Feb 16;43(2):240-7. doi: 10.1021/ar9001685.
7
Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase.用于血红素自身降解的氧分子激活:血红素加氧酶的反应机制和调控。
Inorg Chem. 2010 Apr 19;49(8):3602-9. doi: 10.1021/ic901869t.
8
A novel mechanism of heme degradation to biliverdin studied by QM/MM and QM calculations.通过量子力学/分子力学和量子计算研究血红素降解为胆绿素的新机制。
Dalton Trans. 2018 Jun 25;47(25):8283-8291. doi: 10.1039/c8dt00064f.
9
O(2)- and H(2)O(2)-dependent verdoheme degradation by heme oxygenase: reaction mechanisms and potential physiological roles of the dual pathway degradation.血红素加氧酶催化的依赖O₂和H₂O₂的胆绿素降解:双途径降解的反应机制及潜在生理作用
J Biol Chem. 2005 Nov 4;280(44):36833-40. doi: 10.1074/jbc.M503529200. Epub 2005 Aug 22.
10
Reduction of oxaporphyrin ring of CO-bound α-verdoheme complexed with heme oxygenase-1 by NADPH-cytochrome P450 reductase.NADPH-细胞色素 P450 还原酶还原与血红素加氧酶-1 结合的 CO 结合的 α-变胆素复合物中的氧化卟啉环。
J Inorg Biochem. 2011 Feb;105(2):289-96. doi: 10.1016/j.jinorgbio.2010.11.010. Epub 2010 Nov 26.

引用本文的文献

1
Capturing a glycosylase reaction intermediate in DNA repair by freeze-trapping of a pH-responsive hOGG1 mutant.通过对pH响应性人8-氧代鸟嘌呤DNA糖基化酶1(hOGG1)突变体进行冷冻捕获来捕捉DNA修复中的糖基化酶反应中间体。
Nucleic Acids Res. 2025 Jul 19;53(14). doi: 10.1093/nar/gkaf718.
2
Heme Regulatory Motif of Heme Oxygenase-2 Is Involved in the Interaction with NADPH-Cytochrome P450 Reductase and Regulates Enzymatic Activity.血红素加氧酶-2的血红素调节基序参与与NADPH-细胞色素P450还原酶的相互作用并调节酶活性。
Int J Mol Sci. 2025 Mar 5;26(5):2318. doi: 10.3390/ijms26052318.
3
One ring to bring them all and in the darkness bind them: The trafficking of heme without deliverers.
一戒缚众,黑暗中引其归:无载体血红素的转运。
Biochim Biophys Acta Mol Cell Res. 2021 Jan;1868(1):118881. doi: 10.1016/j.bbamcr.2020.118881. Epub 2020 Oct 3.
4
Conformational Equilibrium of NADPH-Cytochrome P450 Oxidoreductase Is Essential for Heme Oxygenase Reaction.NADPH-细胞色素P450氧化还原酶的构象平衡对血红素加氧酶反应至关重要。
Antioxidants (Basel). 2020 Jul 28;9(8):673. doi: 10.3390/antiox9080673.
5
Recent Advances in the Understanding of the Reaction Chemistries of the Heme Catabolizing Enzymes HO and BVR Based on High Resolution Protein Structures.基于高分辨率蛋白结构对血红素代谢酶 HO 和 BVR 的反应化学的最新理解进展。
Curr Med Chem. 2020;27(21):3499-3518. doi: 10.2174/0929867326666181217142715.
6
The Asp99-Arg188 salt bridge of the Pseudomonas aeruginosa HemO is critical in allowing conformational flexibility during catalysis.铜绿假单胞菌 HemO 的天冬氨酸 99-精氨酸 188 盐桥在催化过程中允许构象灵活性方面至关重要。
J Biol Inorg Chem. 2018 Oct;23(7):1057-1070. doi: 10.1007/s00775-018-1609-x. Epub 2018 Sep 8.
7
Brain iron overload following intracranial haemorrhage.脑出血后的脑铁过载。
Stroke Vasc Neurol. 2016 Dec 19;1(4):172-184. doi: 10.1136/svn-2016-000042. eCollection 2016 Dec.
8
Heme oxygenation and the widening paradigm of heme degradation.血红素加氧酶与血红素降解的扩展范式
Arch Biochem Biophys. 2014 Feb 15;544:87-95. doi: 10.1016/j.abb.2013.10.013. Epub 2013 Oct 23.
9
Structures of the substrate-free and product-bound forms of HmuO, a heme oxygenase from corynebacterium diphtheriae: x-ray crystallography and molecular dynamics investigation.无底物和产物结合形式的 HmuO 的结构:来自白喉棒状杆菌的血红素加氧酶:X 射线晶体学和分子动力学研究。
J Biol Chem. 2013 Nov 29;288(48):34443-58. doi: 10.1074/jbc.M113.486936. Epub 2013 Oct 8.
10
The haptoglobin-CD163-heme oxygenase-1 pathway for hemoglobin scavenging.血红蛋白清除的触珠蛋白-CD163-血红素加氧酶-1 通路。
Oxid Med Cell Longev. 2013;2013:523652. doi: 10.1155/2013/523652. Epub 2013 May 27.