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恶性疟原虫苹果酸脱氢酶的结晶及初步X射线衍射分析

Crystallization and preliminary X-ray diffraction of malate dehydrogenase from Plasmodium falciparum.

作者信息

Wrenger Carsten, Müller Ingrid B, Butzloff Sabine, Jordanova Rositsa, Lunev Sergey, Groves Matthew R

机构信息

Department of Parasitology, Institute of Biomedical Science, University of São Paulo, Avenida Professor Lineu Prestes 1374, 05508-000 Sao Paulo, SP, Brazil.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Jun 1;68(Pt 6):659-62. doi: 10.1107/S1744309112014571. Epub 2012 May 23.

Abstract

The expression, purification, crystallization and preliminary X-ray diffraction characterization of malate dehydrogenase (MDH) from the malarial parasite Plasmodium falciparum (PfMDH) are reported. In order to gain a deeper understanding of the function and role of PfMDH, the protein was purified to homogeneity. The purified protein crystallized in space group P1, with unit-cell parameters a = 72, b = 157, c = 159 Å, α = 105, β = 101, γ = 95°. The resulting crystals diffracted to a maximal resolution of 2.24 Å and the structure has been solved by molecular replacement, with 16 monomers in the asymmetric unit. The 16 monomers are arranged into four independent tetramers, in agreement with previous reports demonstrating the tetrameric solution state of PfMDH. The X-ray structure of PfMDH is expected to clarify the differences in catalysis by PfMDH compared with other MDH family members and to provide a basis for the structure-based design of specific PfMDH inhibitors as well as general MDH inhibitors.

摘要

本文报道了恶性疟原虫苹果酸脱氢酶(PfMDH)的表达、纯化、结晶及初步的X射线衍射表征。为了更深入地了解PfMDH的功能和作用,该蛋白被纯化至均一性。纯化后的蛋白在空间群P1中结晶,晶胞参数为a = 72、b = 157、c = 159 Å,α = 105°、β = 101°、γ = 95°。所得晶体的最大衍射分辨率为2.24 Å,其结构已通过分子置换法解析,不对称单元中有16个单体。这16个单体排列成四个独立的四聚体,与之前证明PfMDH处于四聚体溶液状态的报道一致。PfMDH的X射线结构有望阐明PfMDH与其他苹果酸脱氢酶家族成员在催化作用上的差异,并为基于结构设计特异性PfMDH抑制剂以及通用苹果酸脱氢酶抑制剂提供依据。

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