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来自印度梨形孢的亲环蛋白A样蛋白的克隆、纯化、结晶及初步X射线晶体学分析

Cloning, purification, crystallization and preliminary X-ray crystallographic analysis of a cyclophilin A-like protein from Piriformospora indica.

作者信息

Bhatt Harshesh, Trivedi Dipesh Kumar, Pal Ravi Kant, Johri Atul Kumar, Tuteja Narendra, Bhavesh Neel Sarovar

机构信息

Structural and Computational Biology Group, International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi 110 067, India.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Jun 1;68(Pt 6):709-12. doi: 10.1107/S1744309112018131. Epub 2012 May 24.

Abstract

Cyclophilins are widely distributed both in eukaryotes and prokaryotes and have a primary role as peptidyl-prolyl cis-trans isomerases (PPIases). This study focuses on the cloning, expression, purification and crystallization of a salinity-stress-induced cyclophilin A (CypA) homologue from the symbiotic fungus Piriformospora indica. Crystallization experiments in the presence of 56 mM sodium phosphate monobasic monohydrate, 1.34 M potassium phosphate dibasic pH 8.2 yielded crystals that were suitable for X-ray diffraction analysis. The crystals belonged to the orthorhombic space group C222(1), with unit-cell parameters a = 121.15, b = 144.12, c = 110.63 Å. The crystals diffracted to a resolution limit of 2.0 Å. Analysis of the diffraction data indicated the presence of three molecules of the protein per asymmetric unit (V(M) = 4.48 Å(3) Da(-1), 72.6% solvent content).

摘要

亲环蛋白广泛分布于真核生物和原核生物中,主要作为肽基脯氨酰顺反异构酶(PPIases)发挥作用。本研究聚焦于从共生真菌印度梨形孢中克隆、表达、纯化及结晶一种盐胁迫诱导的亲环蛋白A(CypA)同源物。在含有56 mM磷酸二氢钠一水合物、1.34 M磷酸氢二钾pH 8.2的条件下进行结晶实验,得到了适合X射线衍射分析的晶体。这些晶体属于正交晶系空间群C222(1),晶胞参数a = 121.15、b = 144.12、c = 110.63 Å。晶体衍射分辨率极限为2.0 Å。对衍射数据的分析表明,每个不对称单元中有三个蛋白质分子(V(M) = 4.48 Å(3) Da(-1),溶剂含量72.6%)。

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