Friedrich-Schiller-Universität, Department Pharmaceutical Biology at the Hans-Knöll-Institut, Beutenbergstrasse 11a, 07745 Jena, Germany.
Chembiochem. 2012 Aug 13;13(12):1798-804. doi: 10.1002/cbic.201200187. Epub 2012 Jun 22.
The gene greA was cloned from the genome of the basidiomycete Suillus grevillei. It encodes a monomodular natural product biosynthesis protein composed of three domains for adenylation, thiolation, and thioesterase and, hence, is reminiscent of a nonribosomal peptide synthetase (NRPS). GreA was biochemically characterized in vitro. It was identified as atromentin synthetase and therefore represents one of only a limited number of biochemically characterized NRPS-like enzymes which accept an aromatic α-keto acid. Specificity-conferring amino acid residues--collectively referred to as the nonribosomal code--were predicted for the primary sequence of the GreA adenylation domain and were an unprecedented combination for aromatic α-keto acids. Plausible support for this new code came from in silico simulation of the adenylation domain structure. According to the model, the predicted residues line the active site and, therefore, very likely contribute to substrate specificity.
基因 greA 是从担子菌苏力菌的基因组中克隆出来的。它编码一种单模块天然产物生物合成蛋白,由三个结构域组成,分别为腺苷酸化、硫醇化和硫酯酶,因此让人联想到非核糖体肽合成酶(NRPS)。GreA 在体外进行了生化特性分析。它被鉴定为阿托门汀合成酶,因此代表了为数不多的经过生化特性鉴定的 NRPS 样酶之一,可接受芳香族 α-酮酸。GreA 腺苷酸化结构域的一级序列预测出了特异性决定氨基酸残基——通常称为非核糖体密码子——这是芳香族 α-酮酸的一个前所未有的组合。来自于腺苷酸化结构域结构的计算机模拟为这个新密码子提供了合理的支持。根据该模型,预测的残基排列在活性位点上,因此很可能对底物特异性有贡献。