Department of Molecular Mechanisms of Phenotypic Plasticity, Institut de Biologie Moléculaire des Plantes du CNRS, IBMP-CNRS - UPR2357, Université de Strasbourg, 12, rue du Général Zimmer, F-67084, Strasbourg Cedex, France.
Plant Methods. 2012 Jun 28;8(1):23. doi: 10.1186/1746-4811-8-23.
Cell proliferation is an important determinant of plant growth and development. In addition, modulation of cell-division rate is an important mechanism of plant plasticity and is key in adapting of plants to environmental conditions. One of the greatest challenges in understanding the cell cycle of flowering plants is the large families of CDKs and cyclins that have the potential to form many different complexes. However, it is largely unclear which complexes are active. In addition, there are many CDK- and cyclin-related proteins whose biological role is still unclear, i.e. whether they have indeed enzymatic activity. Thus, a biochemical characterization of these proteins is of key importance for the understanding of their function.
Here we present a straightforward system to systematically express and purify active CDK-cyclin complexes from E. coli extracts. Our method relies on the concomitant production of a CDK activating kinase, which catalyzes the T-loop phosphorylation necessary for kinase activity. Taking the examples of the G1-phase cyclin CYCLIN D3;1 (CYCD3;1), the mitotic cyclin CYCLIN B1;2 (CYCB1;2) and the atypical meiotic cyclin SOLO DANCERS (SDS) in conjunction with A-, B1- and B2-type CDKs, we show that different CDKs can interact with various cyclins in vitro but only a few specific complexes have high levels of kinase activity.
Our work shows that both the cyclin as well as the CDK partner contribute to substrate specificity in plants. These findings refine the interaction networks in cell-cycle control and pinpoint to particular complexes for modulating cell proliferation activity in breeding.
细胞增殖是植物生长和发育的重要决定因素。此外,调节细胞分裂速率是植物可塑性的重要机制,是植物适应环境条件的关键。了解开花植物细胞周期的最大挑战之一是具有形成许多不同复合物潜力的 CDK 和细胞周期蛋白大家族。然而,哪些复合物是活跃的,在很大程度上尚不清楚。此外,还有许多 CDK 和细胞周期蛋白相关蛋白,其生物学作用仍不清楚,即它们是否确实具有酶活性。因此,对这些蛋白质进行生化表征对于理解其功能至关重要。
在这里,我们提出了一种从大肠杆菌提取物中系统表达和纯化有活性的 CDK-细胞周期蛋白复合物的简单方法。我们的方法依赖于同时产生 CDK 激活激酶,该激酶催化 T 环磷酸化,这是激酶活性所必需的。以 G1 期细胞周期蛋白 CYCLIN D3;1(CYCD3;1)、有丝分裂细胞周期蛋白 CYCLIN B1;2(CYCB1;2)和非典型减数分裂细胞周期蛋白 SOLO DANCERS(SDS)为例,与 A、B1 和 B2 型 CDK 结合,我们表明不同的 CDK 可以在体外与各种细胞周期蛋白相互作用,但只有少数特定的复合物具有高水平的激酶活性。
我们的工作表明,细胞周期蛋白和 CDK 伴侣都有助于植物中的底物特异性。这些发现细化了细胞周期控制中的相互作用网络,并确定了用于调节繁殖中细胞增殖活性的特定复合物。