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小纤维胶原、可变区选择性剪接、固有无序和酪氨酸硫酸化。

Minor fibrillar collagens, variable regions alternative splicing, intrinsic disorder, and tyrosine sulfation.

机构信息

Department of Biological Sciences, Boise State University, Boise, ID 83725, USA.

出版信息

Protein Cell. 2012 Jun;3(6):419-33. doi: 10.1007/s13238-012-2917-5. Epub 2012 Jul 1.

Abstract

Minor fibrillar collagen types V and XI, are those less abundant than the fibrillar collagen types I, II and III. The alpha chains share a high degree of similarity with respect to protein sequence in all domains except the variable region. Genomic variation and, in some cases, extensive alternative splicing contribute to the unique sequence characteristics of the variable region. While unique expression patterns in tissues exist, the functions and biological relevance of the variable regions have not been elucidated. In this review, we summarize the existing knowledge about expression patterns and biological functions of the collagen types V and XI alpha chains. Analysis of biochemical similarities among the peptides encoded by each exon of the variable region suggests the potential for a shared function. The alternative splicing, conservation of biochemical characteristics in light of low sequence conservation, and evidence for intrinsic disorder, suggest modulation of binding events between the surface of collagen fibrils and surrounding extracellular molecules as a shared function.

摘要

微纤维胶原类型 V 和 XI 比纤维胶原类型 I、II 和 III 更为稀少。除了可变区之外,所有结构域的α链在蛋白质序列上具有高度相似性。基因组变异和某些情况下广泛的选择性剪接导致了可变区独特的序列特征。虽然在组织中存在独特的表达模式,但可变区的功能和生物学相关性尚未阐明。在这篇综述中,我们总结了关于胶原类型 V 和 XIα链表达模式和生物学功能的现有知识。对可变区每个外显子编码的肽的生化相似性分析表明存在潜在的共同功能。选择性剪接、在低序列保守性下保持生化特性的能力以及内在无序的证据表明,调节胶原纤维表面与周围细胞外分子之间的结合事件是一个共同的功能。

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