Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92093-0204, USA.
Int J Syst Evol Microbiol. 2013 Apr;63(Pt 4):1219-1228. doi: 10.1099/ijs.0.043752-0. Epub 2012 Jun 29.
Bacterial strains CNX-216(T) and CNU-914(T) were isolated from marine sediment samples collected from Palmyra Atoll and off Catalina Island, respectively. Both strains were gram-negative and aerobic and produce deep-orange to pink colonies and alkaloid secondary metabolites. Cells of strain CNX-216(T) were short, non-motile rods, whereas cells of strain CNU-914(T) were short, curved rods with gliding motility. The DNA G+C contents of CNX-216(T) and CNU-914(T) were respectively 57.7 and 44.4 mol%. Strains CNX-216(T) and CNU-914(T) contained MK-7 as the predominant menaquinone and iso-C15 : 0 and C16 : 1ω5c as the major fatty acids. Phylogenetic analyses revealed that both strains belong to the order Cytophagales in the phylum Bacteroidetes. Strain CNX-216(T) exhibited low 16S rRNA gene sequence identity (87.1 %) to the nearest type strain, Cesiribacter roseus 311(T), and formed a well-supported lineage that is outside all currently described families in the order Cytophagales. Strain CNU-914(T) shared 97.6 % 16S rRNA gene sequence identity with 'Porifericola rhodea' N5EA6-3A2B and, together with 'Tunicatimonas pelagia' N5DB8-4 and four uncharacterized marine bacteria isolated as part of this study, formed a lineage that is clearly distinguished from other families in the order Cytophagales. Based on our polyphasic taxonomic characterization, we propose that strains CNX-216(T) and CNU-914(T) represent novel genera and species, for which we propose the names Mooreia alkaloidigena gen. nov., sp. nov. (type strain CNX-216(T) = DSM 25187(T) = KCCM 90102(T)) and Catalinimonas alkaloidigena gen. nov., sp. nov. (type strain CNU-914(T) = DSM 25186(T) = KCCM 90101(T)) within the new families Mooreiaceae fam. nov. and Catalimonadaceae fam. nov.
细菌菌株 CNX-216(T) 和 CNU-914(T) 分别从帕尔米拉环礁和卡特琳娜岛附近的海洋沉积物样本中分离得到。两株菌均为革兰氏阴性菌,兼性好氧,产生深橙色至粉红色的菌落和生物碱次生代谢产物。CNX-216(T) 菌株的细胞为短的、非运动的杆状,而 CNU-914(T) 菌株的细胞为短的、弯曲的杆状,具有滑行运动能力。CNX-216(T) 和 CNU-914(T) 的 DNA G+C 含量分别为 57.7 和 44.4mol%。菌株 CNX-216(T) 和 CNU-914(T) 均以 MK-7 作为主要的类异戊二烯醌,以 iso-C15:0 和 C16:1ω5c 作为主要的脂肪酸。系统发育分析表明,两株菌均属于拟杆菌门的噬细胞目。菌株 CNX-216(T) 与最近的模式菌株 Cesiribacter roseus 311(T) 的 16S rRNA 基因序列相似性较低(87.1%),并形成了一个支持良好的谱系,该谱系不在噬细胞目目前描述的所有科中。菌株 CNU-914(T) 与“Porifericola rhodea”N5EA6-3A2B 的 16S rRNA 基因序列相似性为 97.6%,与“Tunicatimonas pelagia”N5DB8-4 和作为本研究一部分分离的四个未鉴定的海洋细菌一起,形成了一个明显区别于噬细胞目其他科的谱系。基于多相分类学特征,我们建议菌株 CNX-216(T) 和 CNU-914(T) 代表新的属和种,我们提议将其命名为 Mooreia alkaloidigena gen. nov.,sp. nov.(模式菌株 CNX-216(T) = DSM 25187(T) = KCCM 90102(T))和 Catalinimonas alkaloidigena gen. nov.,sp. nov.(模式菌株 CNU-914(T) = DSM 25186(T) = KCCM 90101(T)),属于新的 Mooreiaceae 科和 Catalimonadaceae 科。