Department of Life Science, Sogang University, Seoul, Korea.
Allergy Asthma Immunol Res. 2012 Jul;4(4):199-205. doi: 10.4168/aair.2012.4.4.199. Epub 2012 Feb 23.
The human WD repeat-containing protein 46 (WDR46; also known as C6orf11), located at the disease-relevant centromere side of the class II major histocompatibility complex region, is hypothesized to be associated with risk of aspirin-exacerbated respiratory disease (AERD) as well as a decline in forced expiratory volume in the first second (FEV1), an important diagnostic marker of asthma.
To investigate the association between WDR46 and AERD, five single-nucleotide polymorphisms (SNPs) were genotyped in 93 AERD cases and 96 aspirin-tolerant asthma controls of Korean ethnicity. Three major haplotypes were inferred from pairwise comparison of the SNPs, and one was included in the association analysis. Differences in the frequency distribution of WDR46 SNPs and haplotype were analyzed using logistic and regression models via various modes of genetic inheritance.
Depending on the genetic model, the logistic and regression analyses revealed significant associations between rs463260, rs446735, rs455567, rs469064, and WDR46_ht2 and the risk of AERD (P=0.007-0.04, P(corr)=0.01-0.04) and FEV1 decline after aspirin provocation (P=0.006-0.03, P(corr)=0.01-0.03). Furthermore, functional analysis in silico showed that the G>A allele of rs463260 located in the 5' untranslated region potentially matched a nucleotide sequence within an upstream open reading frame of WDR46.
These findings show for the first time that WDR46 is an important genetic marker of aspirin-induced airway inflammation and may be useful for formulating new disease-management strategies.
人类 WD 重复蛋白 46(WDR46;也称为 C6orf11)位于 II 类主要组织相容性复合物区域的疾病相关着丝粒侧,据推测与阿司匹林加重的呼吸道疾病(AERD)风险以及第一秒用力呼气量(FEV1)下降有关,FEV1 是哮喘的一个重要诊断标志物。
为了研究 WDR46 与 AERD 之间的关联,对 93 例 AERD 病例和 96 例韩国裔阿司匹林耐受哮喘对照者的 5 个单核苷酸多态性(SNP)进行了基因分型。通过 SNP 的两两比较推断出 3 个主要单倍型,并将其中一个纳入关联分析。使用逻辑和回归模型通过不同的遗传模式分析 WDR46 SNP 和单倍型的频率分布差异。
根据遗传模型,逻辑和回归分析显示 rs463260、rs446735、rs455567、rs469064 和 WDR46_ht2 与 AERD 风险(P=0.007-0.04,P(corr)=0.01-0.04)和阿司匹林激发后 FEV1 下降(P=0.006-0.03,P(corr)=0.01-0.03)之间存在显著关联。此外,计算机功能分析显示位于 5'非翻译区的 rs463260 的 G>A 等位基因可能与 WDR46 的上游开放阅读框内的一个核苷酸序列匹配。
这些发现首次表明 WDR46 是阿司匹林诱导的气道炎症的重要遗传标志物,可能有助于制定新的疾病管理策略。