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保守活性位点组氨酸在小檗碱桥酶中的催化和结构作用。

Catalytic and structural role of a conserved active site histidine in berberine bridge enzyme.

机构信息

Institute of Biochemistry, Graz University of Technology, Petersgasse 12/2, A-8010 Graz, Austria.

出版信息

Biochemistry. 2012 Aug 7;51(31):6139-47. doi: 10.1021/bi300411n. Epub 2012 Jul 25.

Abstract

Berberine bridge enzyme (BBE) is a paradigm for the class of bicovalently flavinylated oxidases, which catalyzes the oxidative cyclization of (S)-reticuline to (S)-scoulerine. His174 was identified as an important active site residue because of its role in the stabilization of the reduced state of the flavin cofactor. It is also strictly conserved in the family of BBE-like oxidases. Here, we present a detailed biochemical and structural characterization of a His174Ala variant supporting its importance during catalysis and for the structural organization of the active site. Substantial changes in all kinetic parameters and a decrease in midpoint potential were observed for the BBE His174Ala variant protein. Moreover, the crystal structure of the BBE His174Ala variant showed significant structural rearrangements compared to wild-type enzyme. On the basis of our findings, we propose that His174 is part of a hydrogen bonding network that stabilizes the negative charge at the N1-C2=O locus via interaction with the hydroxyl group at C2' of the ribityl side chain of the flavin cofactor. Hence, replacement of this residue with alanine reduces the stabilizing effect for the transiently formed negative charge and results in drastically decreased kinetic parameters as well as a lower midpoint redox potential.

摘要

小檗碱桥酶(BBE)是双共价黄素氧化酶类的典范,它催化(S)-延胡索乙素氧化环化生成(S)-山荷叶碱。由于 His174 残基在黄素辅因子还原态的稳定中起作用,因此被确定为重要的活性位点残基。它在 BBE 样氧化酶家族中也是严格保守的。在这里,我们对 His174Ala 变体进行了详细的生化和结构表征,该变体支持其在催化过程中和活性位点结构组织中的重要性。BBE His174Ala 变体蛋白的所有动力学参数都发生了实质性变化,中点电位降低。此外,与野生型酶相比,BBE His174Ala 变体的晶体结构显示出明显的结构重排。基于我们的发现,我们提出 His174 是氢键网络的一部分,通过与黄素辅因子核醇侧链的 C2' 羟基相互作用,稳定 N1-C2=O 位置的负电荷。因此,用丙氨酸取代该残基会降低对瞬态形成的负电荷的稳定作用,导致动力学参数急剧下降,中点氧化还原电位降低。

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