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对不同种族人群中 BRCA1 基因 185delAG 突变的单体型分析。

Haplotype analysis of the 185delAG BRCA1 mutation in ethnically diverse populations.

机构信息

The Susanne Levy Gertner Oncogenetics Unit, The Danek Gertner Institute of Human Genetics, Chaim Sheba Medical Center, Tel-Hashomer, Israel.

出版信息

Eur J Hum Genet. 2013 Feb;21(2):212-6. doi: 10.1038/ejhg.2012.124. Epub 2012 Jul 4.

Abstract

The 185delAG* BRCA1 mutation is encountered primarily in Jewish Ashkenazi and Iraqi individuals, and sporadically in non-Jews. Previous studies estimated that this is a founder mutation in Jewish mutation carriers that arose before the dispersion of Jews in the Diaspora ~2500 years ago. The aim of this study was to assess the haplotype in ethnically diverse 185delAG* BRCA1 mutation carriers, and to estimate the age at which the mutation arose. Ethnically diverse Jewish and non-Jewish 185delAGBRCA1 mutation carriers and their relatives were genotyped using 15 microsatellite markers and three SNPs spanning 12.5 MB, encompassing the BRCA1 gene locus. Estimation of mutation age was based on a subset of 11 markers spanning a region of ~5 MB, using a previously developed algorithm applying the maximum likelihood method. Overall, 188 participants (154 carriers and 34 noncarriers) from 115 families were included: Ashkenazi, Iraq, Kuchin-Indians, Syria, Turkey, Iran, Tunisia, Bulgaria, non-Jewish English, non-Jewish Malaysian, and Hispanics. Haplotype analysis indicated that the 185delAG mutation arose 750-1500 years ago. In Ashkenazim, it is a founder mutation that arose 61 generations ago, and with a small group of founder mutations was introduced into the Hispanic population (conversos) ~650 years ago, and into the Iraqi-Jewish community ~450 years ago. The 185delAG mutation in the non-Jewish populations in Malaysia and the UK arose at least twice independently. We conclude that the 185delAG BRCA1 mutation resides on a common haplotype among Ashkenazi Jews, and arose about 61 generations ago and arose independently at least twice in non-Jews.

摘要

185delAGBRCA1 突变主要见于犹太阿什肯纳兹人和伊拉克人,也偶见于非犹太人。先前的研究估计,这是一个约 2500 年前犹太人散居之前在犹太突变携带者中出现的创始人突变。本研究旨在评估在种族多样化的 185delAGBRCA1 突变携带者中的单倍型,并估计该突变发生的年龄。使用 15 个微卫星标记和跨越 12.5MB 的三个 SNP,对来自 115 个家庭的种族多样化的犹太和非犹太 185delAGBRCA1 突变携带者及其亲属进行基因分型,涵盖 BRCA1 基因座。基于先前开发的应用最大似然法的算法,使用跨越约 5MB 区域的 11 个标记的子集来估计突变年龄。总体而言,有 188 名参与者(154 名携带者和 34 名非携带者)来自 115 个家庭:阿什肯纳兹人、伊拉克人、库钦印第安人、叙利亚人、土耳其人、伊朗人、突尼斯人、保加利亚人、非犹太英语人、非犹太马来西亚人和西班牙裔人。单倍型分析表明,185delAG 突变发生在 750-1500 年前。在阿什肯纳兹人中,它是一个 61 代前出现的创始人突变,并且与一小群创始人突变一起被引入西班牙裔人群(conversos)约 650 年前,以及进入伊拉克犹太社区约 450 年前。马来西亚和英国的非犹太人群中 185delAG 突变至少两次独立发生。我们得出结论,185delAGBRCA1 突变位于阿什肯纳兹犹太人中的常见单倍型上,约在 61 代前发生,并且在非犹太人中至少独立发生了两次。

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