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核蛋白丝形成是细菌蛋白 H-NS 基因沉默的结构基础。

Nucleoprotein filament formation is the structural basis for bacterial protein H-NS gene silencing.

机构信息

NUS Graduate school For Integrative Sciences and Engineering, Singapore 119077.

出版信息

Sci Rep. 2012;2:509. doi: 10.1038/srep00509. Epub 2012 Jul 13.

DOI:10.1038/srep00509
PMID:22798986
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3396134/
Abstract

H-NS is an abundant nucleoid-associated protein in bacteria that globally silences genes, including horizontally-acquired genes related to pathogenesis. Although it has been shown that H-NS has multiple modes of DNA-binding, which mode is employed in gene silencing is still unclear. Here, we report that in H-NS mutants that are unable to silence genes, are unable to form a rigid H-NS nucleoprotein filament. These results indicate that the H-NS nucleoprotein filament is crucial for its gene silencing function, and serves as the fundamental structural basis for gene silencing by H-NS and likely other H-NS-like bacterial proteins.

摘要

H-NS 是细菌中丰富的核蛋白相关蛋白,可全局沉默基因,包括与发病机制相关的水平获得基因。尽管已经表明 H-NS 具有多种 DNA 结合模式,但在基因沉默中采用哪种模式仍不清楚。在这里,我们报告说,在无法沉默基因的 H-NS 突变体中,无法形成刚性的 H-NS 核蛋白丝。这些结果表明 H-NS 核蛋白丝对于其基因沉默功能至关重要,并且是 H-NS 和可能其他 H-NS 样细菌蛋白进行基因沉默的基本结构基础。

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本文引用的文献

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Nucleic Acids Res. 2012 Apr;40(8):3316-28. doi: 10.1093/nar/gkr1247. Epub 2011 Dec 19.
2
Salmonella enterica response regulator SsrB relieves H-NS silencing by displacing H-NS bound in polymerization mode and directly activates transcription.肠沙门氏菌反应调节蛋白 SsrB 通过置换以聚合模式结合的 H-NS 来解除 H-NS 的沉默抑制作用,并直接激活转录。
J Biol Chem. 2011 Jan 21;286(3):1895-902. doi: 10.1074/jbc.M110.164962. Epub 2010 Nov 8.
3
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J Microbiol. 2024 Nov;62(11):999-1012. doi: 10.1007/s12275-024-00182-5. Epub 2024 Nov 11.
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Unravelling the Biophysical Properties of Chromatin Proteins and DNA Using Acoustic Force Spectroscopy.利用声力学光谱技术揭示染色质蛋白和 DNA 的生物物理特性。
Methods Mol Biol. 2024;2819:519-534. doi: 10.1007/978-1-0716-3930-6_24.
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In Vitro Transcription Assay to Quantify Effects of H-NS Filaments on RNA Chain Elongation by RNA Polymerase.体外转录实验定量分析 H-NS 丝对 RNA 聚合酶 RNA 链延伸的影响。
Methods Mol Biol. 2024;2819:381-419. doi: 10.1007/978-1-0716-3930-6_18.
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