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进化系统生物学:新兴综合的历史和哲学视角。

Evolutionary systems biology: historical and philosophical perspectives on an emerging synthesis.

机构信息

Department of Philosophy, University of Sydney, Sydney, Australia.

出版信息

Adv Exp Med Biol. 2012;751:1-28. doi: 10.1007/978-1-4614-3567-9_1.

Abstract

Systems biology (SB) is at least a decade old now and maturing rapidly. A more recent field, evolutionary systems biology (ESB), is in the process of further developing system-level approaches through the expansion of their explanatory and potentially predictive scope. This chapter will outline the varieties of ESB existing today by tracing the diverse roots and fusions that make up this integrative project. My approach is philosophical and historical. As well as examining the recent origins of ESB, I will reflect on its central features and the different clusters of research it comprises. In its broadest interpretation, ESB consists of five overlapping approaches: comparative and correlational ESB; network architecture ESB; network property ESB; population genetics ESB; and finally, standard evolutionary questions answered with SB methods. After outlining each approach with examples, I will examine some strong general claims about ESB, particularly that it can be viewed as the next step toward a fuller modern synthesis of evolutionary biology (EB), and that it is also the way forward for evolutionary and systems medicine. I will conclude with a discussion of whether the emerging field of ESB has the capacity to combine an even broader scope of research aims and efforts than it presently does.

摘要

系统生物学(SB)现在已经至少有十年的历史了,并且发展迅速。一个较新的领域,进化系统生物学(ESB),正在通过扩展其解释和潜在预测范围,进一步发展系统水平的方法。本章将通过追溯构成这一综合项目的各种不同的根源和融合,概述当今存在的 ESB 的多样性。我的方法是哲学和历史的。除了考察 ESB 的最近起源外,我还将反思其核心特征以及它所包含的不同研究集群。从最广泛的意义上说,ESB 由五种重叠的方法组成:比较和相关 ESB;网络架构 ESB;网络属性 ESB;群体遗传学 ESB;最后,用 SB 方法回答标准进化问题。在举例概述每种方法之后,我将考察一些关于 ESB 的强有力的一般主张,特别是它可以被视为朝着进化生物学(EB)更全面的现代综合迈进的下一步,也是进化和系统医学的前进方向。最后,我将讨论新兴的 ESB 领域是否有能力将更广泛的研究目标和努力结合起来,而不仅仅是目前的情况。

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