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真盲缺目动物的染色体进化

Chromosome evolution in Eulipotyphla.

作者信息

Biltueva L, Vorobieva N

机构信息

Institute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.

出版信息

Cytogenet Genome Res. 2012;137(2-4):154-64. doi: 10.1159/000339889. Epub 2012 Jul 26.

DOI:10.1159/000339889
PMID:22846716
Abstract

We integrated chromosome painting information on 5 core-insectivora species available in the literature with new Zoo-FISH data for Iberian shrew (Sorex granarius) and Altai mole (Talpa altaica). Our analysis of these 7 species allowed us to determine the chromosomal features of Eulipotyphla genomes and to update the previously proposed ancestral karyotype for 2 main groups of the Sorex genus. The chromosome painting evidence with human painting probes (HSA) reveals the presence of the 2 unique associations HSA4/5 and 1/10p/12/22b, which support Eulipotyphla. There are a series of synapomorphies both for Erinaceidae (HSA3/1/5, 3/17, 11/15 and 10/20) and for Soricinae (HSA5/9, 6/7/16, 8/3/21 and 11/12/22). We found associations that link Talpidae/Erinaceidae (HSA7/8, 1/5 and 1/19p), Talpidae/Soricidae (HSA1/8/4) and Erinaceidae/Soricidae (HSA4/20 and 2/13). Genome conservation in Eulipotyphla was estimated on the basis of the number of evolutionary breaks in the ancestral mammalian chromosomes. In total, 7 chromosomes of the boreo-eutherian ancestor (BEA8 or 10, 9, 17, 18, 20-22) were retained in all eulipotyphlans studied; among them moles show the highest level of chromosome conservation. The integration of sequence data into the chromosome painting information allowed us to further examine the chromosomal syntenies within a phylogenetic perspective. Based on our analysis we offer the most parsimonious reconstruction of phylogenetic relationships in Eulipotyphla. The cytogenetic reconstructions based on these data do not conflict with molecular phylogenies supporting basal position of Talpidae in the order.

摘要

我们将文献中可得的5种食虫目核心物种的染色体涂染信息与伊比利亚鼩鼱(Sorex granarius)和阿尔泰鼹鼠(Talpa altaica)的新的动物园荧光原位杂交(Zoo-FISH)数据进行了整合。我们对这7个物种的分析使我们能够确定真盲缺目基因组的染色体特征,并更新先前提出的鼩鼱属两个主要类群的祖先核型。用人涂染探针(HSA)进行的染色体涂染证据揭示了两种独特的关联HSA4/5和1/10p/12/22b的存在,这支持了真盲缺目。猬科(HSA3/1/5、3/17、11/15和10/20)和鼩鼱亚科(HSA5/9、6/7/16、8/3/21和11/12/22)都有一系列共衍征。我们发现了将鼹科/猬科(HSA7/8、1/5和1/19p)、鼹科/鼩鼱科(HSA1/8/4)和猬科/鼩鼱科(HSA4/20和2/13)联系起来的关联。基于祖先哺乳动物染色体上进化断点的数量估计了真盲缺目的基因组保守性。在所有研究的真盲缺目动物中总共保留了北方真兽类祖先(BEA8或10、9、17-18、20-22)的7条染色体;其中鼹鼠的染色体保守水平最高。将序列数据整合到染色体涂染信息中使我们能够在系统发育的视角下进一步研究染色体同线性。基于我们的分析,我们提供了真盲缺目中系统发育关系的最简约重建。基于这些数据的细胞遗传学重建与支持鼹科在该目基部位置的分子系统发育并不冲突。

相似文献

1
Chromosome evolution in Eulipotyphla.真盲缺目动物的染色体进化
Cytogenet Genome Res. 2012;137(2-4):154-64. doi: 10.1159/000339889. Epub 2012 Jul 26.
2
Zoo-FISH in the European mole (Talpa europaea) detects all ancestral Boreo-Eutherian human homologous chromosome associations.在欧洲鼹鼠(Talpa europaea)中进行的动物荧光原位杂交(Zoo-FISH)检测到了所有与人类同源的北方真兽类祖先染色体关联。
Cytogenet Genome Res. 2006;115(2):154-7. doi: 10.1159/000095236.
3
Karyotype evolution of eulipotyphla (insectivora): the genome homology of seven sorex species revealed by comparative chromosome painting and banding data.真盲缺目(食虫目)的核型进化:通过比较染色体涂染和带型数据揭示的七种鼩鼱属物种的基因组同源性
Cytogenet Genome Res. 2011;135(1):51-64. doi: 10.1159/000330577. Epub 2011 Sep 12.
4
Cross-species chromosome painting unveils cytogenetic signatures for the Eulipotyphla and evidence for the polyphyly of Insectivora.跨物种染色体描绘揭示了真盲缺目的细胞遗传学特征以及食虫目的多系起源证据。
Chromosome Res. 2006;14(2):151-9. doi: 10.1007/s10577-006-1032-y. Epub 2006 Mar 17.
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Cross-species chromosome painting in the golden mole and elephant-shrew: support for the mammalian clades Afrotheria and Afroinsectiphillia but not Afroinsectivora.金毛鼹和象鼩的跨物种染色体描绘:支持非洲兽总目和非洲食虫目这两个哺乳类分支,但不支持非洲食虫目。
Proc Biol Sci. 2004 Jul 22;271(1547):1477-84. doi: 10.1098/rspb.2004.2754.
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Application of molecular cytogenetics for chromosomal evolution of the Lemuriformes (Prosimians).分子细胞遗传学在狐猴科(原猴亚目)染色体进化中的应用。
Cytogenet Genome Res. 2005;108(1-3):197-203. doi: 10.1159/000080816.
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Chromosome painting between human and lorisiform prosimians: evidence for the HSA 7/16 synteny in the primate ancestral karyotype.人类与狐猴型原猴亚目的染色体涂染:灵长类祖先核型中人类7号/16号染色体同线性的证据
Am J Phys Anthropol. 2006 Feb;129(2):250-9. doi: 10.1002/ajpa.20299.
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Maximum likelihood analysis of the complete mitochondrial genomes of eutherians and a reevaluation of the phylogeny of bats and insectivores.真兽类完整线粒体基因组的最大似然分析以及蝙蝠和食虫动物系统发育的重新评估。
J Mol Evol. 2001 Oct-Nov;53(4-5):508-16. doi: 10.1007/s002390010241.
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Origins of primate chromosomes - as delineated by Zoo-FISH and alignments of human and mouse draft genome sequences.灵长类染色体的起源——通过动物荧光原位杂交及人类和小鼠基因组草图序列比对来描绘
Cytogenet Genome Res. 2005;108(1-3):122-38. doi: 10.1159/000080810.
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Towards the delineation of the ancestral eutherian genome organization: comparative genome maps of human and the African elephant (Loxodonta africana) generated by chromosome painting.迈向原始真兽类基因组结构的描绘:通过染色体涂染生成的人类与非洲象(Loxodonta africana)的比较基因组图谱。
Proc Biol Sci. 2003 Jul 7;270(1522):1331-40. doi: 10.1098/rspb.2003.2383.

引用本文的文献

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Chromosomal Evolution of the Talpinae.兔形目染色体的演化。
Genes (Basel). 2023 Jul 19;14(7):1472. doi: 10.3390/genes14071472.
2
Satellitome Analysis on Genome and Inferences about the satDNAs Evolution on Some Talpidae.卫星组分析基因组和对一些鼹科动物 satDNA 进化的推断。
Genes (Basel). 2022 Dec 31;14(1):117. doi: 10.3390/genes14010117.
3
Chromosomal evolution among leaf-nosed nectarivorous bats--evidence from cross-species chromosome painting (Phyllostomidae, Chiroptera).叶鼻蝠属(叶口蝠科,翼手目)的染色体进化——种间染色体涂染证据
BMC Evol Biol. 2013 Dec 26;13:276. doi: 10.1186/1471-2148-13-276.