Biltueva L, Vorobieva N
Institute of Molecular and Cellular Biology, SB RAS, Novosibirsk, Russia.
Cytogenet Genome Res. 2012;137(2-4):154-64. doi: 10.1159/000339889. Epub 2012 Jul 26.
We integrated chromosome painting information on 5 core-insectivora species available in the literature with new Zoo-FISH data for Iberian shrew (Sorex granarius) and Altai mole (Talpa altaica). Our analysis of these 7 species allowed us to determine the chromosomal features of Eulipotyphla genomes and to update the previously proposed ancestral karyotype for 2 main groups of the Sorex genus. The chromosome painting evidence with human painting probes (HSA) reveals the presence of the 2 unique associations HSA4/5 and 1/10p/12/22b, which support Eulipotyphla. There are a series of synapomorphies both for Erinaceidae (HSA3/1/5, 3/17, 11/15 and 10/20) and for Soricinae (HSA5/9, 6/7/16, 8/3/21 and 11/12/22). We found associations that link Talpidae/Erinaceidae (HSA7/8, 1/5 and 1/19p), Talpidae/Soricidae (HSA1/8/4) and Erinaceidae/Soricidae (HSA4/20 and 2/13). Genome conservation in Eulipotyphla was estimated on the basis of the number of evolutionary breaks in the ancestral mammalian chromosomes. In total, 7 chromosomes of the boreo-eutherian ancestor (BEA8 or 10, 9, 17, 18, 20-22) were retained in all eulipotyphlans studied; among them moles show the highest level of chromosome conservation. The integration of sequence data into the chromosome painting information allowed us to further examine the chromosomal syntenies within a phylogenetic perspective. Based on our analysis we offer the most parsimonious reconstruction of phylogenetic relationships in Eulipotyphla. The cytogenetic reconstructions based on these data do not conflict with molecular phylogenies supporting basal position of Talpidae in the order.
我们将文献中可得的5种食虫目核心物种的染色体涂染信息与伊比利亚鼩鼱(Sorex granarius)和阿尔泰鼹鼠(Talpa altaica)的新的动物园荧光原位杂交(Zoo-FISH)数据进行了整合。我们对这7个物种的分析使我们能够确定真盲缺目基因组的染色体特征,并更新先前提出的鼩鼱属两个主要类群的祖先核型。用人涂染探针(HSA)进行的染色体涂染证据揭示了两种独特的关联HSA4/5和1/10p/12/22b的存在,这支持了真盲缺目。猬科(HSA3/1/5、3/17、11/15和10/20)和鼩鼱亚科(HSA5/9、6/7/16、8/3/21和11/12/22)都有一系列共衍征。我们发现了将鼹科/猬科(HSA7/8、1/5和1/19p)、鼹科/鼩鼱科(HSA1/8/4)和猬科/鼩鼱科(HSA4/20和2/13)联系起来的关联。基于祖先哺乳动物染色体上进化断点的数量估计了真盲缺目的基因组保守性。在所有研究的真盲缺目动物中总共保留了北方真兽类祖先(BEA8或10、9、17-18、20-22)的7条染色体;其中鼹鼠的染色体保守水平最高。将序列数据整合到染色体涂染信息中使我们能够在系统发育的视角下进一步研究染色体同线性。基于我们的分析,我们提供了真盲缺目中系统发育关系的最简约重建。基于这些数据的细胞遗传学重建与支持鼹科在该目基部位置的分子系统发育并不冲突。