Nutritional Sciences Research Division, King's College London, Franklin Wilkins Building, 150 Stamford Street, London SE1 9NH, UK.
BMC Evol Biol. 2012 Aug 3;12:137. doi: 10.1186/1471-2148-12-137.
Duplicated glucocorticoid receptors (GR) are present in most teleost fish. The evolutionary advantage of retaining two GRs is unclear, as no subtype specific functional traits or physiological roles have been defined. To identify factors driving the retention of duplicate GRs in teleosts, the current study examined GRs in representatives of two basal ray-finned fish taxa that emerged either side of the teleost lineage whole genome duplication event (WGD) event, the acipenseriform, Acipenser ruthenus, (pre-WGD) and the osteoglossimorph, Pantodon buchholzi, (post-WGD).
The study identified a single GR in A. ruthenus (ArGR) and two GRs in P. buchholzi (PbGR1 and PbGR2). Phylogenetic analyses showed that ArGR formed a distinct branch separate from the teleosts GRs. The teleost GR lineage was subdivded into two sublineages, each of which contained one of the two P. buchholzi GRs. ArGR, PbGR1 and PbGR2 all possess the unique 9 amino acid insert between the zinc-fingers of the DNA-binding domain that is present in one of the teleost GR lineages (GR1), but not the other (GR2). A splice variant of PbGR2 produces an isoform that lacked these 9 amino acids (PbGR2b). Cortisol stimulated transactivation activity of ArGR, PbGR2b and PbGR1 in vitro; with PbGR2b and PbGR1, the glucocorticoid 11-deoxycortisol was a more potent agonist than cortisol. The hormone sensitivity of PbGR2b and PbGR1 differed in the transactivation assay, with PbGR2b having lower EC50 values and greater fold induction.
The difference in transactivation activity sensitivity between duplicated GRs of P. buchholzi suggests potential functional differences between the paralogs emerged early in the teleost lineage. Given the pleiotropic nature of GR function in vertebrates, this finding is in accordance with the hypothesis that duplicated GRs were potentially retained through subfunctionalisation followed by gene sharing. A 9 amino acid insert in the DNA-binding domain emerged in basal ray-finned fish GRs. However, the presence of a PbGR2 splice variant that lacks this insert, as well as the loss of the exon encoding these amino acids in the genes encoding for other teleost GR2 suggests the selection of two receptors with different DNA-binding domain structures in teleosts.
大多数硬骨鱼类都存在重复的糖皮质激素受体(GR)。保留两个 GR 的进化优势尚不清楚,因为尚未定义任何亚型特异性功能特征或生理作用。为了确定驱动硬骨鱼类重复 GR 保留的因素,本研究在经历硬骨鱼类全基因组复制事件(WGD)之前和之后的两个基础射线鳍鱼类分类群的代表中检查了 GR,即鲟形目,Acipenser ruthenus(前 WGD)和骨舌鱼目,Pantodon buchholzi(后 WGD)。
本研究在 A. ruthenus 中鉴定出单个 GR(ArGR),在 P. buchholzi 中鉴定出两个 GR(PbGR1 和 PbGR2)。系统发育分析表明,ArGR 形成了一个与硬骨鱼类 GR 分开的独特分支。硬骨鱼类 GR 谱系分为两个亚谱系,每个谱系都包含 P. buchholzi 的两个 GR 之一。ArGR、PbGR1 和 PbGR2 都在 DNA 结合域锌指之间具有 9 个氨基酸的独特插入,该插入存在于一个硬骨鱼类 GR 谱系(GR1)中,但不存在于另一个谱系(GR2)中。PbGR2 的剪接变体产生一种缺少这 9 个氨基酸的同工型(PbGR2b)。皮质醇在体外刺激 ArGR、PbGR2b 和 PbGR1 的转录激活活性;对于 PbGR2b 和 PbGR1,糖皮质激素 11-脱氧皮质醇是比皮质醇更强的激动剂。在转录激活测定中,PbGR2b 和 PbGR1 的激素敏感性不同,PbGR2b 的 EC50 值较低,诱导倍数较大。
P. buchholzi 重复 GR 之间的转录激活活性敏感性差异表明,在硬骨鱼类谱系早期出现的这些旁系同源物之间可能存在潜在的功能差异。鉴于 GR 功能在脊椎动物中的多效性,这一发现符合这样的假设,即重复的 GR 可能是通过亚功能化和基因共享而保留下来的。在基础射线鳍鱼类 GR 中出现了 DNA 结合域中的 9 个氨基酸插入。然而,存在缺乏这种插入的 PbGR2 剪接变体,以及编码其他硬骨鱼类 GR2 的基因中编码这些氨基酸的外显子缺失,表明在硬骨鱼类中选择了具有不同 DNA 结合域结构的两种受体。