• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

嗜糖栖热厌氧杆菌JW/SL-YS485新型GH120β-木糖苷酶(XylC)的结晶及初步X射线衍射分析

Crystallization and preliminary X-ray diffraction analysis of a novel GH120 β-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485.

作者信息

Liu Wenting, Sun Yu, Ko Tzu-Ping, Wiegel Juergen, Shao Weilan, Lu Fuping, Guo Rey-Ting, Huang Chun-Hsiang

机构信息

Tianjin Key Laboratory of Industrial Microbiology, College of Biotechnology, Tianjin University of Science and Technology, Tianjin 300457, People's Republic of China.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Aug 1;68(Pt 8):914-6. doi: 10.1107/S1744309112025328. Epub 2012 Jul 31.

DOI:10.1107/S1744309112025328
PMID:22869121
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3412772/
Abstract

Xylosidases hydrolyze xylopolymers at the nonreducing end to free xylose units. The β-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485 was expressed in Escherichia coli and the recombinant protein was purified and crystallized. A BLASTP search with the XylC protein sequence showed that no similar structure had previously been solved. XylC was classified as a member of the new glycoside hydrolase family GH120 according to the CAZy website (http://www.cazy.org/). Crystals belonging to the monoclinic space group P2(1), with unit-cell parameters a = 88.36, b = 202.20, c = 99.87 Å, β = 99.04°, were obtained by the sitting-drop vapour-diffusion method and diffracted to 2.2 Å resolution. Structure determination using MIR and MAD methods is in progress.

摘要

木糖苷酶在非还原端水解木聚糖聚合物,释放出木糖单元。嗜糖热厌氧杆菌JW/SL-YS485的β-木糖苷酶(XylC)在大肠杆菌中表达,重组蛋白经纯化和结晶。对XylC蛋白序列进行BLASTP搜索表明,此前尚未解析出类似结构。根据CAZy网站(http://www.cazy.org/),XylC被归类为新的糖苷水解酶家族GH120的成员。通过坐滴气相扩散法获得了属于单斜空间群P2(1)的晶体,其晶胞参数为a = 88.36、b = 202.20、c = 99.87 Å、β = 99.04°,衍射分辨率达到2.2 Å。目前正在使用MIR和MAD方法进行结构测定。

相似文献

1
Crystallization and preliminary X-ray diffraction analysis of a novel GH120 β-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485.嗜糖栖热厌氧杆菌JW/SL-YS485新型GH120β-木糖苷酶(XylC)的结晶及初步X射线衍射分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Aug 1;68(Pt 8):914-6. doi: 10.1107/S1744309112025328. Epub 2012 Jul 31.
2
The substrate/product-binding modes of a novel GH120 β-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485.一株嗜热解糖梭菌 JW/SL-YS485 来源的新型 GH120β-木聚糖酶(XylC)的底物/产物结合模式。
Biochem J. 2012 Dec 15;448(3):401-7. doi: 10.1042/BJ20121359.
3
Characterization of a novel beta-xylosidase, XylC, from Thermoanaerobacterium saccharolyticum JW/SL-YS485.从嗜热解纤维梭菌 JW/SL-YS485 中鉴定出一种新型β-木糖苷酶,命名为 XylC。
Appl Environ Microbiol. 2011 Feb;77(3):719-26. doi: 10.1128/AEM.01511-10. Epub 2010 Dec 3.
4
Crystallization and preliminary X-ray crystallographic analysis of beta-xylosidase from Thermoanaerobacterium saccharolyticum, a thermophilic anaerobe.嗜热厌氧糖解热厌氧菌β-木糖苷酶的结晶及初步X射线晶体学分析
Acta Crystallogr D Biol Crystallogr. 2002 Mar;58(Pt 3):531-2. doi: 10.1107/s0907444902000227. Epub 2002 Feb 21.
5
Crystallization and preliminary X-ray diffraction analysis of a novel β-L-arabinofuranosidase (HypBA1) from Bifidobacterium longum.来自长双歧杆菌的新型β-L-阿拉伯呋喃糖苷酶(HypBA1)的结晶及初步X射线衍射分析
Acta Crystallogr F Struct Biol Commun. 2014 May;70(Pt 5):636-8. doi: 10.1107/S2053230X14001812. Epub 2014 Apr 17.
6
Crystallization and preliminary crystallographic analysis of a thermostable family 52 beta-D-xylosidase from Geobacillus stearothermophilus T-6.嗜热栖热放线菌T-6来源的52家族耐热β-D-木糖苷酶的结晶及初步晶体学分析
Acta Crystallogr D Biol Crystallogr. 2004 Aug;60(Pt 8):1461-3. doi: 10.1107/S0907444904013320. Epub 2004 Jul 21.
7
Isolation, analysis, and expression of two genes from Thermoanaerobacterium sp. strain JW/SL YS485: a beta-xylosidase and a novel acetyl xylan esterase with cephalosporin C deacetylase activity.嗜热厌氧菌JW/SL YS485中两个基因的分离、分析及表达:一种β-木糖苷酶和一种具有头孢菌素C脱乙酰酶活性的新型乙酰木聚糖酯酶
J Bacteriol. 1997 Sep;179(17):5436-41. doi: 10.1128/jb.179.17.5436-5441.1997.
8
Crystallization and preliminary crystallographic analysis of a family 43 beta-D-xylosidase from Geobacillus stearothermophilus T-6.嗜热栖热放线菌T-6家族43β-D-木糖苷酶的结晶及初步晶体学分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Dec 1;61(Pt 12):1054-7. doi: 10.1107/S1744309105036262. Epub 2005 Nov 12.
9
Crystallization and preliminary X-ray analysis of alpha-xylosidase from Escherichia coli.来自大肠杆菌的α-木糖苷酶的结晶及初步X射线分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Feb 1;61(Pt 2):178-9. doi: 10.1107/S1744309104033202. Epub 2005 Jan 8.
10
Crystal structure of beta-D-xylosidase from Thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase.嗜糖栖热厌氧菌β-D-木糖苷酶的晶体结构,一种39家族糖苷水解酶
J Mol Biol. 2004 Jan 2;335(1):155-65. doi: 10.1016/j.jmb.2003.10.026.

引用本文的文献

1
The substrate/product-binding modes of a novel GH120 β-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485.一株嗜热解糖梭菌 JW/SL-YS485 来源的新型 GH120β-木聚糖酶(XylC)的底物/产物结合模式。
Biochem J. 2012 Dec 15;448(3):401-7. doi: 10.1042/BJ20121359.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Characterization of a novel beta-xylosidase, XylC, from Thermoanaerobacterium saccharolyticum JW/SL-YS485.从嗜热解纤维梭菌 JW/SL-YS485 中鉴定出一种新型β-木糖苷酶,命名为 XylC。
Appl Environ Microbiol. 2011 Feb;77(3):719-26. doi: 10.1128/AEM.01511-10. Epub 2010 Dec 3.
3
pHsh vectors, a novel expression system of Escherichia coli for the large-scale production of recombinant enzymes.pHsh 载体,一种新型大肠杆菌表达系统,用于大规模生产重组酶。
Biotechnol Lett. 2010 Jun;32(6):795-801. doi: 10.1007/s10529-010-0223-y. Epub 2010 Feb 14.
4
Hemicellulose bioconversion.半纤维素生物转化
J Ind Microbiol Biotechnol. 2003 May;30(5):279-91. doi: 10.1007/s10295-003-0049-x. Epub 2003 Apr 16.
5
Isolation, analysis, and expression of two genes from Thermoanaerobacterium sp. strain JW/SL YS485: a beta-xylosidase and a novel acetyl xylan esterase with cephalosporin C deacetylase activity.嗜热厌氧菌JW/SL YS485中两个基因的分离、分析及表达:一种β-木糖苷酶和一种具有头孢菌素C脱乙酰酶活性的新型乙酰木聚糖酯酶
J Bacteriol. 1997 Sep;179(17):5436-41. doi: 10.1128/jb.179.17.5436-5441.1997.
6
Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin.人亲免素FKBP-12与FK506及雷帕霉素复合物的原子结构。
J Mol Biol. 1993 Jan 5;229(1):105-24. doi: 10.1006/jmbi.1993.1012.
7
Solvent content of protein crystals.蛋白质晶体的溶剂含量。
J Mol Biol. 1968 Apr 28;33(2):491-7. doi: 10.1016/0022-2836(68)90205-2.