• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

万种脊椎动物基因组计划中的鱼类。

The fishes of Genome 10K.

作者信息

Bernardi Giacomo, Wiley Edward O, Mansour Hicham, Miller Michael R, Orti Guillermo, Haussler David, O'Brien Stephen J, Ryder Oliver A, Venkatesh Byrappa

机构信息

Department of Ecology and Evolutionary Biology, University of California Santa Cruz, CA, USA.

出版信息

Mar Genomics. 2012 Sep;7:3-6. doi: 10.1016/j.margen.2012.02.002. Epub 2012 Mar 24.

DOI:10.1016/j.margen.2012.02.002
PMID:22897955
Abstract

The Genome 10K project aims to sequence the genomes of 10,000 vertebrates, representing approximately one genome for each vertebrate genus. Since fishes (cartilaginous fishes, ray-finned fishes and lobe-finned fishes) represent more than 50% of extant vertebrates, it is planned to target 4,000 fish genomes. At present, nearly 60 fish genomes are being sequenced at various public funded labs, and under a Genome 10K and BGI pilot project. An additional 100 fishes have been identified for sequencing in the next phase of Genome 10K project.

摘要

“基因组10K计划”旨在对10000种脊椎动物的基因组进行测序,大约每个脊椎动物属测一个基因组。由于鱼类(软骨鱼、硬骨鱼和肉鳍鱼)占现存脊椎动物的比例超过50%,因此计划对4000种鱼类基因组进行测序。目前,在各个公共资助实验室以及“基因组10K计划”和华大基因的一个试点项目中,近60种鱼类的基因组正在进行测序。在“基因组10K计划”的下一阶段,又确定了另外100种鱼类进行测序。

相似文献

1
The fishes of Genome 10K.万种脊椎动物基因组计划中的鱼类。
Mar Genomics. 2012 Sep;7:3-6. doi: 10.1016/j.margen.2012.02.002. Epub 2012 Mar 24.
2
Rapidly evolving fish genomes and teleost diversity.快速进化的鱼类基因组与硬骨鱼多样性。
Curr Opin Genet Dev. 2008 Dec;18(6):544-50. doi: 10.1016/j.gde.2008.11.001. Epub 2008 Dec 16.
3
From 2R to 3R: evidence for a fish-specific genome duplication (FSGD).从2R到3R:鱼类特异性基因组复制(FSGD)的证据
Bioessays. 2005 Sep;27(9):937-45. doi: 10.1002/bies.20293.
4
Observations on the radiation of lobe-finned fishes, ray-finned fishes, and cartilaginous fishes: phylogeny of the opioid/orphanin gene family and the 2R hypothesis.对有颌类鱼、硬骨鱼和软骨鱼辐射的观察:阿片类孤儿基因家族的系统发育和 2R 假说。
Gen Comp Endocrinol. 2011 Jan 15;170(2):253-64. doi: 10.1016/j.ygcen.2010.09.023. Epub 2010 Oct 16.
5
Fish-T1K (Transcriptomes of 1,000 Fishes) Project: large-scale transcriptome data for fish evolution studies.鱼类-1000转录组计划(Fish-T1K):用于鱼类进化研究的大规模转录组数据。
Gigascience. 2016 May 3;5:18. doi: 10.1186/s13742-016-0124-7. eCollection 2016.
6
Genome size, GC percentage and 5mC level in the Indonesian coelacanth Latimeria menadoensis.印度尼西亚腔棘鱼(Latimeria menadoensis)的基因组大小、GC含量和5-甲基胞嘧啶水平。
Mar Genomics. 2011 Sep;4(3):167-72. doi: 10.1016/j.margen.2011.04.001. Epub 2011 Jul 8.
7
Comparative genomics in teleost species: Knowledge transfer by linking the genomes of model and non-model fish species.硬骨鱼类比较基因组学:通过连接模式和非模式鱼类物种的基因组进行知识转移。
Comp Biochem Physiol Part D Genomics Proteomics. 2011 Mar;6(1):92-102. doi: 10.1016/j.cbd.2010.09.003. Epub 2010 Sep 19.
8
Chromosomal distribution and evolution of repetitive DNAs in fish.鱼类中重复DNA的染色体分布与进化
Genome Dyn. 2012;7:197-221. doi: 10.1159/000337950. Epub 2012 Jun 25.
9
Gnathostome phylogenomics utilizing lungfish EST sequences.利用肺鱼EST序列的有颌类系统发育基因组学
Mol Biol Evol. 2009 Feb;26(2):463-71. doi: 10.1093/molbev/msn271. Epub 2008 Nov 24.
10
A practical approach to phylogenomics: the phylogeny of ray-finned fish (Actinopterygii) as a case study.系统发育基因组学的实用方法:以辐鳍鱼纲(Actinopterygii)的系统发育为例
BMC Evol Biol. 2007 Mar 20;7:44. doi: 10.1186/1471-2148-7-44.

引用本文的文献

1
Genetic improvement and genomic resources of important cyprinid species: status and future perspectives for sustainable production.重要鲤科鱼类的遗传改良与基因组资源:可持续生产的现状与未来展望
Front Genet. 2024 Sep 19;15:1398084. doi: 10.3389/fgene.2024.1398084. eCollection 2024.
2
Salmonidae Genome: Features, Evolutionary and Phylogenetic Characteristics.鲑科鱼类基因组:特征、进化和系统发育特征。
Genes (Basel). 2022 Nov 27;13(12):2221. doi: 10.3390/genes13122221.
3
RNA-Seq of Single Fish Cells - Seeking Out the Leukocytes Mediating Immunity in Teleost Fishes.
单细胞鱼类 RNA-Seq 分析——寻找参与硬骨鱼类免疫的白细胞。
Front Immunol. 2022 Jan 24;13:798712. doi: 10.3389/fimmu.2022.798712. eCollection 2022.
4
Genome size estimation of brackishwater fishes and penaeid shrimps by flow cytometry.利用流式细胞术估算咸淡水鱼类和对虾的基因组大小
Mol Biol Rep. 2018 Oct;45(5):951-960. doi: 10.1007/s11033-018-4243-3. Epub 2018 Jul 14.
5
A Seed Mismatch Enhances Argonaute2-Catalyzed Cleavage and Partially Rescues Severely Impaired Cleavage Found in Fish.种子错配增强 Argonaute2 催化的切割,并部分挽救在鱼类中发现的严重受损的切割。
Mol Cell. 2017 Dec 21;68(6):1095-1107.e5. doi: 10.1016/j.molcel.2017.11.032.
6
Phylogenetic classification of bony fishes.硬骨鱼类的系统发育分类
BMC Evol Biol. 2017 Jul 6;17(1):162. doi: 10.1186/s12862-017-0958-3.
7
Molecular Cytogenetic Analysis of the European Hake Merluccius merluccius (Merlucciidae, Gadiformes): U1 and U2 snRNA Gene Clusters Map to the Same Location.欧洲无须鳕(鳕科,鳕形目)的分子细胞遗传学分析:U1和U2小核仁RNA基因簇定位于同一位置。
PLoS One. 2015 Dec 30;10(12):e0146150. doi: 10.1371/journal.pone.0146150. eCollection 2015.
8
Genome engineering: Drosophila melanogaster and beyond.基因组工程:黑腹果蝇及其他。
Wiley Interdiscip Rev Dev Biol. 2016 Mar-Apr;5(2):233-67. doi: 10.1002/wdev.214. Epub 2015 Oct 8.
9
The Genome 10K Project: a way forward.基因组 10K 项目:前进之路。
Annu Rev Anim Biosci. 2015;3:57-111. doi: 10.1146/annurev-animal-090414-014900.
10
SeqAssist: a novel toolkit for preliminary analysis of next-generation sequencing data.SeqAssist:一种用于下一代测序数据初步分析的新型工具包。
BMC Bioinformatics. 2014;15 Suppl 11(Suppl 11):S10. doi: 10.1186/1471-2105-15-S11-S10. Epub 2014 Oct 21.