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向日葵(Helianthus annuus L.)中新型锈病抗性基因 R(12)的分子标记。

Molecular tagging of a novel rust resistance gene R(12) in sunflower (Helianthus annuus L.).

机构信息

Department of Plant Pathology, North Dakota State University, Fargo, ND 58102, USA.

出版信息

Theor Appl Genet. 2013 Jan;126(1):93-9. doi: 10.1007/s00122-012-1962-z. Epub 2012 Aug 21.

DOI:10.1007/s00122-012-1962-z
PMID:22907633
Abstract

Sunflower production in North America has recently suffered economic losses in yield and seed quality from sunflower rust (Puccinia helianthi Schwein.) because of the increasing incidence and lack of resistance to new rust races. RHA 464, a newly released sunflower male fertility restorer line, is resistant to both of the most predominant and most virulent rust races identified in the Northern Great Plains of the USA. The gene conditioning rust resistance in RHA 464 originated from wild Helianthus annuus L., but has not been molecularly marked or determined to be independent from other rust loci. The objectives of this study are to identify molecular markers linked to the rust resistance gene and to investigate the allelism of this gene with the unmapped rust resistance genes present in HA-R6, HA-R8 and RHA 397. Virulence phenotypes of seedlings for the F(2) population and F(2:3) families suggested that a single dominant gene confers rust resistance in RHA 464, and this gene was designated as R(12). Bulked segregant analysis identified ten markers polymorphic between resistant and susceptible bulks. In subsequent genetic mapping, the ten markers covered 33.4 cM of genetic distance on linkage group 11 of sunflower. A co-dominant marker CRT275-11 is the closest marker distal to R(12) with a genetic distance of 1.0 cM, while ZVG53, a dominant marker linked in the repulsion phase, is proximal to R(12) with a genetic distance of 9.6 cM. The allelism test demonstrated that R(12) is not allelic to the rust resistance genes in HA-R6, HA-R8 and RHA 397, and it is also not linked to any previously mapped rust resistance genes. Discovery of the R(12) novel rust resistance locus in sunflower and associated markers will potentially support the molecular marker-assisted introgression and pyramiding of R(12) into sunflower breeding lines.

摘要

向日葵生产在北美最近遭受了经济损失,产量和种子质量下降,因为向日葵锈病(Puccinia helianthi Schwein.)的发病率增加,而且缺乏对新锈病的抗性。RHA 464 是一种新发布的向日葵雄性育性恢复系,对美国大北方平原最主要和最毒力的锈病菌株均有抗性。RHA 464 中控制锈病抗性的基因来源于野生向日葵 Helianthus annuus L.,但尚未进行分子标记,也没有确定其与其他锈病基因座无关。本研究的目的是鉴定与锈病抗性基因连锁的分子标记,并研究该基因与 HA-R6、HA-R8 和 RHA 397 中未定位的锈病抗性基因的等位性。F2 群体和 F2:3 家系的幼苗毒力表型表明,一个显性基因赋予 RHA 464 锈病抗性,该基因被命名为 R(12)。混池分离分析在抗性和感病混池之间鉴定出 10 个多态性标记。在随后的遗传作图中,这 10 个标记覆盖了向日葵第 11 连锁群上 33.4cM 的遗传距离。一个共显性标记 CRT275-11 是与 R(12)最近的标记,遗传距离为 1.0cM,而 ZVG53 是一个与 R(12)连锁的显性标记,遗传距离为 9.6cM。等位性测试表明,R(12)与 HA-R6、HA-R8 和 RHA 397 中的锈病抗性基因不是等位基因,也与任何已定位的锈病抗性基因无关。在向日葵中发现 R(12)的新锈病抗性基因座及其相关标记,将有助于分子标记辅助导入和将 R(12)导入向日葵育种系。

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本文引用的文献

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Cloning of molecular markers for disease resistance in sunflower, Helianthus annuus L.向日葵(Helianthus annuus L.)抗病性分子标记的克隆
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RFLP and RAPD mapping of the sunflower Pl1 locus for resistance to Plasmopara halstedii race 1.向日葵 Pl1 位点对 1 号菌核菌 Plasmopara halstedii 抗性的 RFLP 和 RAPD 图谱。
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利用测序精细定位技术解析向日葵(L.)抗病基因簇的遗传基础
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Map and sequence-based chromosome walking towards cloning of the male fertility restoration gene Rf5 linked to R in sunflower.基于图谱和序列的染色体步行,以克隆与向日葵 R 基因连锁的雄性育性恢复基因 Rf5。
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Marker-Assisted Gene Pyramiding and the Reliability of Using SNP Markers Located in the Recombination Suppressed Regions of Sunflower ( L.).标记辅助基因聚合与利用位于向日葵(L.)重组抑制区的 SNP 标记的可靠性。
Genes (Basel). 2019 Dec 20;11(1):10. doi: 10.3390/genes11010010.
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Introgression and monitoring of wild Helianthus praecox alien segments associated with Sclerotinia basal stalk rot resistance in sunflower using genotyping-by-sequencing.利用基于测序的基因型分析鉴定与向日葵基腐病抗性相关的野生向日葵外源片段的渗入及其监测
PLoS One. 2019 Mar 1;14(3):e0213065. doi: 10.1371/journal.pone.0213065. eCollection 2019.
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Sunflower Hybrid Breeding: From Markers to Genomic Selection.向日葵杂交育种:从标记到基因组选择。
Front Plant Sci. 2018 Jan 17;8:2238. doi: 10.3389/fpls.2017.02238. eCollection 2017.
10
Development and dissection of diagnostic SNP markers for the downy mildew resistance genes Pl and Pl and maker-assisted gene pyramiding in sunflower (Helianthus annuus L.).向日葵(Helianthus annuus L.)霜霉病抗性基因Pl和Pl的诊断性单核苷酸多态性(SNP)标记的开发与剖析以及标记辅助基因聚合
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基于多次杂交,开发了一个包含 10000 个基因座的向日葵基因组遗传图谱。
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Genetics and mapping of the R₁₁ gene conferring resistance to recently emerged rust races, tightly linked to male fertility restoration, in sunflower (Helianthus annuus L.).向日葵(Helianthus annuus L.)中与雄性育性恢复紧密连锁、对新近出现的锈菌小种具有抗性的 R₁₁ 基因的遗传和定位。
Theor Appl Genet. 2012 Sep;125(5):921-32. doi: 10.1007/s00122-012-1883-x. Epub 2012 May 19.
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Molecular mapping of the Pl(16) downy mildew resistance gene from HA-R4 to facilitate marker-assisted selection in sunflower.从 HA-R4 中对 Pl(16) 霜霉病抗性基因进行分子作图,以促进向日葵中的标记辅助选择。
Theor Appl Genet. 2012 Jun;125(1):121-31. doi: 10.1007/s00122-012-1820-z. Epub 2012 Feb 21.
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SNP discovery and development of a high-density genotyping array for sunflower.SNP 的发现和一种用于向日葵的高密度基因分型芯片的开发。
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Molecular mapping of the rust resistance gene R ( 4 ) to a large NBS-LRR cluster on linkage group 13 of sunflower.向日葵连锁群 13 上一个大的 NBS-LRR 簇中锈病抗性基因 R(4)的分子图谱。
Theor Appl Genet. 2011 Jul;123(2):351-8. doi: 10.1007/s00122-011-1588-6. Epub 2011 Apr 11.
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Downy mildew (Pl ( 8 ) and Pl ( 14 )) and rust (R ( Adv )) resistance genes reside in close proximity to tandemly duplicated clusters of non-TIR-like NBS-LRR-encoding genes on sunflower chromosomes 1 and 13.褪绿斑病(Pl ( 8 ) 和 Pl ( 14 ))和锈病(R ( Adv ))抗性基因与向日葵染色体 1 和 13 上串联重复的非 TIR 样 NBS-LRR 编码基因簇紧密相邻。
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Identification of resistance to new virulent races of rust in sunflowers and validation of DNA markers in the gene pool.鉴定向日葵对新型毒性锈菌的抗性及在基因库中 DNA 标记的验证。
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Fine mapping of the sunflower resistance locus Pl(ARG) introduced from the wild species Helianthus argophyllus.从野生向日葵 Helianthus argophyllus 中引入的向日葵抗性基因 Pl(ARG)的精细定位。
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