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非整联蛋白层粘连蛋白受体相互作用蛋白的综合蛋白质组学分析。

Comprehensive proteomic analysis of nonintegrin laminin receptor interacting proteins.

机构信息

Gene Therapy Center, Cancer Institute and Department of Pathology, New York University School of Medicine, 550 First Avenue, New York, New York 10016, United States.

出版信息

J Proteome Res. 2012 Oct 5;11(10):4863-72. doi: 10.1021/pr300307h. Epub 2012 Aug 29.

Abstract

Human nonintegrin laminin receptor is a multifunctional protein acting as an integral component of the ribosome and a cell surface receptor for laminin-1. The laminin receptor is overexpressed in several human cancers and is also the cell surface receptor for several viruses and pathogenic prion proteins, making it a pathologically significant protein. This study focused on the proteomic characterization of laminin receptor interacting proteins from Mus musculus. The use of affinity chromatography with immobilized recombinant laminin receptor coupled with mass spectrometry analysis identified 45 proteins with high confidence. Following validation through coimmunoprecipitation, the proteins were classified based on predicted function into ribosomal, RNA processing, signal transduction/metabolism, protein processing, cytoskeleton/cell anchorage, DNA/chromatin, and unknown functions. A significant portion of the identified proteins is related to functions or localizations previously described for laminin receptor. This work represents a comprehensive proteomic approach to studying laminin receptor and provides an essential stepping stone to a better mechanistic understanding of this protein's diverse functions.

摘要

人层粘连蛋白非整合素受体是一种多功能蛋白,作为核糖体的组成部分和层粘连蛋白-1的细胞表面受体发挥作用。层粘连蛋白受体在几种人类癌症中过表达,也是几种病毒和致病性朊病毒蛋白的细胞表面受体,使其成为一种具有病理意义的蛋白。本研究专注于从小鼠中鉴定层粘连蛋白受体相互作用蛋白的蛋白质组学特征。使用固定化重组层粘连蛋白受体的亲和层析与质谱分析相结合,高可信度地鉴定了 45 种蛋白质。通过共免疫沉淀验证后,根据预测功能将蛋白质分类为核糖体、RNA 加工、信号转导/代谢、蛋白质加工、细胞骨架/细胞锚定、DNA/染色质和未知功能。鉴定出的蛋白质中有很大一部分与层粘连蛋白受体先前描述的功能或定位有关。这项工作代表了一种全面的蛋白质组学方法来研究层粘连蛋白受体,并为更好地理解该蛋白的多种功能提供了重要的基础。

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