Department of Chemistry, Institute of Biophysical Dynamics, James Franck Institute, and Computation Institute, University of Chicago, 5735S Ellis Avenue, Chicago, IL 60637, USA.
J Mol Biol. 2012 Nov 9;423(5):800-17. doi: 10.1016/j.jmb.2012.08.010. Epub 2012 Aug 24.
Epsin possesses a conserved epsin N-terminal homology (ENTH) domain that acts as a phosphatidylinositol 4,5-bisphosphate-lipid-targeting and membrane-curvature-generating element. Upon binding phosphatidylinositol 4,5-bisphosphate, the N-terminal helix (H(0)) of the ENTH domain becomes structured and aids in the aggregation of ENTH domains, which results in extensive membrane remodeling. In this article, atomistic and coarse-grained (CG) molecular dynamics (MD) simulations are used to investigate the structure and the stability of ENTH domain aggregates on lipid bilayers. EPR experiments are also reported for systems composed of different ENTH-bound membrane morphologies, including membrane vesicles as well as preformed membrane tubules. The EPR data are used to help develop a molecular model of ENTH domain aggregates on preformed lipid tubules that are then studied by CG MD simulation. The combined computational and experimental approach suggests that ENTH domains exist predominantly as monomers on vesiculated structures, while ENTH domains self-associate into dimeric structures and even higher-order oligomers on the membrane tubes. The results emphasize that the arrangement of ENTH domain aggregates depends strongly on whether the local membrane curvature is isotropic or anisotropic. The molecular mechanism of ENTH-domain-induced membrane vesiculation and tubulation and the implications of the epsin's role in clathrin-mediated endocytosis resulting from the interplay between ENTH domain membrane binding and ENTH domain self-association are also discussed.
Epsin 拥有一个保守的 epsin N 端同源(ENTH)结构域,作为一个磷酸肌醇 4,5-二磷酸脂质靶向和膜曲率生成元件。在结合磷酸肌醇 4,5-二磷酸后,ENTH 结构域的 N 端螺旋(H(0))变得有结构,并有助于 ENTH 结构域的聚集,从而导致广泛的膜重塑。在本文中,使用原子和粗粒(CG)分子动力学(MD)模拟来研究 ENTH 结构域聚集体在脂质双层上的结构和稳定性。还报告了 EPR 实验,用于研究不同 ENTH 结合膜形态的系统,包括膜泡以及预先形成的膜管。EPR 数据用于帮助开发预先形成的脂质管上的 ENTH 结构域聚集体的分子模型,然后通过 CG MD 模拟进行研究。综合计算和实验方法表明,在囊泡化结构上,ENTH 结构域主要以单体形式存在,而在膜管上,ENTH 结构域自组装成二聚体结构甚至更高阶的寡聚物。结果强调了 ENTH 结构域聚集体的排列强烈依赖于局部膜曲率是各向同性还是各向异性。还讨论了 ENTH 结构域诱导的膜囊泡化和管状化的分子机制,以及 epsin 在网格蛋白介导的内吞作用中的作用,这是由于 ENTH 结构域与膜的结合和 ENTH 结构域的自组装之间的相互作用所致。