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本文引用的文献

1
The phosphodiesterase DipA (PA5017) is essential for Pseudomonas aeruginosa biofilm dispersion.磷酸二酯酶 DipA(PA5017)是铜绿假单胞菌生物膜分散所必需的。
J Bacteriol. 2012 Jun;194(11):2904-15. doi: 10.1128/JB.05346-11. Epub 2012 Apr 6.
2
Gain-of-function mutations cluster in distinct regions associated with the signalling pathway in the PAS domain of the aerotaxis receptor, Aer.功能获得性突变聚集在与 Aer 气敏受体 PAS 结构域中信号通路相关的不同区域。
Mol Microbiol. 2010 Aug;77(3):575-86. doi: 10.1111/j.1365-2958.2010.07231.x. Epub 2010 Jun 1.
3
PAS domain containing chemoreceptor couples dynamic changes in metabolism with chemotaxis.PAS 结构域包含的化学感受器将代谢的动态变化与趋化性联系起来。
Proc Natl Acad Sci U S A. 2010 Feb 2;107(5):2235-40. doi: 10.1073/pnas.0910055107. Epub 2010 Jan 19.
4
A novel signaling network essential for regulating Pseudomonas aeruginosa biofilm development.一种调控铜绿假单胞菌生物膜发育的新型信号网络。
PLoS Pathog. 2009 Nov;5(11):e1000668. doi: 10.1371/journal.ppat.1000668. Epub 2009 Nov 20.
5
Structure and signaling mechanism of Per-ARNT-Sim domains.PER-ARNT-SIM 结构域的结构与信号机制。
Structure. 2009 Oct 14;17(10):1282-94. doi: 10.1016/j.str.2009.08.011.
6
Nitric oxide signaling in Pseudomonas aeruginosa biofilms mediates phosphodiesterase activity, decreased cyclic di-GMP levels, and enhanced dispersal.铜绿假单胞菌生物膜中的一氧化氮信号传导介导磷酸二酯酶活性、降低环二鸟苷酸水平并增强分散。
J Bacteriol. 2009 Dec;191(23):7333-42. doi: 10.1128/JB.00975-09. Epub 2009 Oct 2.
7
Effects of carbon and oxygen limitations and calcium concentrations on biofilm removal processes.碳、氧限制和钙离子浓度对生物膜去除过程的影响。
Biotechnol Bioeng. 1991 Jan 5;37(1):17-25. doi: 10.1002/bit.260370105.
8
NO sensing in Pseudomonas aeruginosa: structure of the transcriptional regulator DNR.铜绿假单胞菌中的无NO感应:转录调节因子DNR的结构
J Mol Biol. 2008 May 16;378(5):1002-15. doi: 10.1016/j.jmb.2008.03.013. Epub 2008 Mar 14.
9
BifA, a cyclic-Di-GMP phosphodiesterase, inversely regulates biofilm formation and swarming motility by Pseudomonas aeruginosa PA14.双功能A(BifA)是一种环二鸟苷酸磷酸二酯酶,它对铜绿假单胞菌PA14的生物膜形成和群体运动起反向调节作用。
J Bacteriol. 2007 Nov;189(22):8165-78. doi: 10.1128/JB.00586-07. Epub 2007 Jun 22.
10
The transition metal gallium disrupts Pseudomonas aeruginosa iron metabolism and has antimicrobial and antibiofilm activity.过渡金属镓会破坏铜绿假单胞菌的铁代谢,具有抗菌和抗生物膜活性。
J Clin Invest. 2007 Apr;117(4):877-88. doi: 10.1172/JCI30783. Epub 2007 Mar 15.

PAS 结构域残基和辅基参与铜绿假单胞菌生物膜中 BdlA 依赖性分散反应。

PAS domain residues and prosthetic group involved in BdlA-dependent dispersion response by Pseudomonas aeruginosa biofilms.

机构信息

Department of Biological Sciences, Binghamton University, Binghamton, New York, USA.

出版信息

J Bacteriol. 2012 Nov;194(21):5817-28. doi: 10.1128/JB.00780-12. Epub 2012 Aug 24.

DOI:10.1128/JB.00780-12
PMID:22923587
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3486124/
Abstract

Biofilm dispersion by Pseudomonas aeruginosa in response to environmental cues is dependent on the cytoplasmic BdlA protein harboring two sensory PAS domains and a chemoreceptor domain, TarH. The closest known and previously characterized BdlA homolog is the flavin adenine dinucleotide (FAD)-binding Aer, the redox potential sensor and aerotaxis transducer in Escherichia coli. Here, we made use of alanine replacement mutagenesis of the BdlA PAS domain residues previously demonstrated to be essential for aerotaxis in Aer to determine whether BdlA is a potential sensory protein. Five substitutions (D14A, N23A, W60A, I109A, and W182A) resulted in a null phenotype for dispersion. One protein, the BdlA protein with the G31A mutation (BdlA-G31A), transmitted a constant signal-on bias as it rendered P. aeruginosa biofilms hyperdispersive. The hyperdispersive phenotype correlated with increased interaction of BdlA-G31A with the phosphodiesterase DipA under biofilm growth conditions, resulting in increased phosphodiesterase activity and reduced biofilm biomass accumulation. We furthermore demonstrate that BdlA is a heme-binding protein. None of the BdlA protein variants analyzed led to a loss of the heme prosthetic group. The N-terminal PASa domain was identified as the heme-binding domain of BdlA, with BdlA-dependent nutrient-induced dispersion requiring the PASa domain. The findings suggest that BdlA plays a role in intracellular sensing of dispersion-inducing conditions and together with DipA forms a regulatory network that modulates an intracellular cyclic d-GMP (c-di-GMP) pool to enable dispersion.

摘要

铜绿假单胞菌对环境信号的生物膜分散响应依赖于含有两个感应 PAS 结构域和一个化学感受器结构域的细胞质 BdlA 蛋白 TarH。目前已知的最接近的 BdlA 同源物是黄素腺嘌呤二核苷酸(FAD)结合 Aer,它是大肠杆菌中的氧化还原电位传感器和趋氧转导蛋白。在这里,我们利用先前在 Aer 中对 Aer 趋氧性至关重要的 BdlA PAS 结构域残基的丙氨酸替换突变,来确定 BdlA 是否是一种潜在的感觉蛋白。五个取代(D14A、N23A、W60A、I109A 和 W182A)导致分散的表型缺失。一种蛋白质,即 BdlA 蛋白中的 G31A 突变(BdlA-G31A),由于它使铜绿假单胞菌生物膜超分散,因此表现出恒定的信号开启偏差。超分散表型与 BdlA-G31A 与磷酸二酯酶 DipA 在生物膜生长条件下的相互作用增加有关,导致磷酸二酯酶活性增加和生物膜生物量积累减少。我们还证明 BdlA 是一种血红素结合蛋白。分析的 BdlA 蛋白变体都没有导致血红素辅基丢失。N 端 PASa 结构域被鉴定为 BdlA 的血红素结合结构域,BdlA 依赖性营养诱导的分散需要 PASa 结构域。研究结果表明,BdlA 在细胞内感应分散诱导条件中发挥作用,与 DipA 一起形成一个调节网络,调节细胞内循环二鸟苷酸(c-di-GMP)池,从而实现分散。