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2 型大麻素受体基因在人精子中表达研究中参照基因选择的影响。

Impact of reference gene selection for type 2 cannabinoid receptor gene expression studies in human spermatozoa.

机构信息

Endocannabinoid Research Group, Reproductive Science Section, Department of Cancer Studies and Molecular Medicine, University of Leicester, Leicester, UK.

出版信息

Andrologia. 2013 Aug;45(4):278-84. doi: 10.1111/and.12006. Epub 2012 Aug 29.

DOI:10.1111/and.12006
PMID:22928818
Abstract

Quantitative real-time polymerase chain reaction (qRT-PCR) has been employed to study the gene expression profiles in human spermatozoa, but accurate analysis is dependent upon normalisation of data against an endogenous control. β-Actin (ACTB) and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) are the most commonly used reference genes for normalisation of gene expression in human spermatozoa, but the expression of these genes in many tissues has considerable variation under different physiological, pathological and experimental conditions which limits their effectiveness in normalisation. The expression stability of a panel of 12 reference genes was studied in normal and pathological human spermatozoa using geNorm and NormFinder software. Although there were some discrepancies in the ranking of reference gene stability, each software program ranked B2 M, ACTB, CYC1 and 18S RNA within the top 5 and recommended the combined use of at least two reference genes. Normalisation of qRT-PCR data for the cannabinoid receptor type 2 in spermatozoa using the different housekeeping genes demonstrated how, without validation, conflicting results are obtained. We recommend that the arbitrary use of reference genes should be avoided and the validation of reference gene stability should be undertaken prior to every study. For normalisation of CB2 expression, we would recommend using the geometric mean of B2 M and ACTB.

摘要

实时荧光定量聚合酶链反应(qRT-PCR)已被用于研究人类精子中的基因表达谱,但准确的分析依赖于针对内参基因对数据进行归一化。β-肌动蛋白(ACTB)和甘油醛-3-磷酸脱氢酶(GAPDH)是人类精子基因表达归一化最常用的参考基因,但这些基因在许多组织中的表达在不同的生理、病理和实验条件下存在很大的变化,这限制了它们在归一化中的有效性。使用 geNorm 和 NormFinder 软件研究了一组 12 个参考基因在正常和病理人类精子中的表达稳定性。尽管在参考基因稳定性的排名上存在一些差异,但每个软件程序都将 B2M、ACTB、CYC1 和 18S RNA 排在前 5 位,并建议至少使用两个参考基因进行组合。使用不同管家基因对精子中大麻素受体 2 进行 qRT-PCR 数据归一化的结果表明,如果不进行验证,就会得到相互矛盾的结果。我们建议避免任意使用参考基因,并在进行每项研究之前验证参考基因的稳定性。对于 CB2 表达的归一化,我们建议使用 B2M 和 ACTB 的几何平均值。

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