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簇上的粒子群结构预测。

Particle-swarm structure prediction on clusters.

机构信息

State Key Laboratory of Superhard Materials, Jilin University, Changchun 130012, China.

出版信息

J Chem Phys. 2012 Aug 28;137(8):084104. doi: 10.1063/1.4746757.

Abstract

We have developed an efficient method for cluster structure prediction based on the generalization of particle swarm optimization (PSO). A local version of PSO algorithm was implemented to utilize a fine exploration of potential energy surface for a given non-periodic system. We have specifically devised a technique of so-called bond characterization matrix (BCM) to allow the proper measure on the structural similarity. The BCM technique was then employed to eliminate similar structures and define the desirable local search spaces. We find that the introduction of point group symmetries into generation of cluster structures enables structural diversity and apparently avoids the generation of liquid-like (or disordered) clusters for large systems, thus considerably improving the structural search efficiency. We have incorporated Metropolis criterion into our method to further enhance the structural evolution towards low-energy regimes of potential energy surfaces. Our method has been extensively benchmarked on Lennard-Jones clusters with different sizes up to 150 atoms and applied into prediction of new structures of medium-sized Li(n) (n = 20, 40, 58) clusters. High search efficiency was achieved, demonstrating the reliability of the current methodology and its promise as a major method on cluster structure prediction.

摘要

我们开发了一种基于粒子群优化(PSO)推广的高效团簇结构预测方法。实现了局部版本的 PSO 算法,以对给定的非周期性系统进行潜在能量表面的精细探索。我们专门设计了一种所谓的键特征矩阵(BCM)技术,以允许对结构相似性进行适当的度量。然后,我们使用 BCM 技术来消除相似结构并定义理想的局部搜索空间。我们发现,在生成团簇结构时引入点群对称性可以实现结构多样性,并明显避免为大型系统生成类似液体(或无序)的团簇,从而大大提高了结构搜索效率。我们已经将马氏准则纳入我们的方法中,以进一步促进结构向潜在能量表面的低能区演化。我们的方法已经在不同尺寸的 Lennard-Jones 团簇上进行了广泛的基准测试,最大可达 150 个原子,并应用于预测中等大小 Li(n)(n = 20、40、58)团簇的新结构。实现了高搜索效率,证明了当前方法的可靠性及其作为团簇结构预测主要方法的潜力。

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