Karasavvas Konstantinos, Wolstencroft Katy, Mina Eleni, Cruickshank Don, Williams Alan, De Roure David, Goble Carole, Roos Marco
Netherlands Bioinformatics Centre, Nijmegen, The Netherlands.
Stud Health Technol Inform. 2012;175:131-41.
The combination of highly complex biology problems and varying IT skills among life scientists poses a unique challenge in designing bioinformatics programs. The set of tools and initiatives described in this work shows new ways of making life science workflows more accessible to the community. Our aim is to help bioinformaticians help biologists. We present how to make Taverna workflows available from within Galaxy, both widely used bioinformatics platforms. Calling Galaxy tools from Taverna is also discussed. In addition, we describe a web application that allows a user to run arbitrary Taverna workflows by only using a web browser.
生命科学家面临的高度复杂的生物学问题与不同的信息技术技能相结合,在设计生物信息学程序时构成了独特的挑战。这项工作中描述的一系列工具和举措展示了让生命科学工作流程更容易为社区所用的新方法。我们的目标是帮助生物信息学家助力生物学家。我们展示了如何在Galaxy(两个广泛使用的生物信息学平台)中使用Taverna工作流程。还讨论了从Taverna调用Galaxy工具的方法。此外,我们描述了一个网络应用程序,用户仅通过使用网络浏览器就能运行任意的Taverna工作流程。