Pietrzyk Agnieszka J, Panjikar Santosh, Bujacz Anna, Mueller-Dieckmann Jochen, Lochynska Malgorzata, Jaskolski Mariusz, Bujacz Grzegorz
Center for Biocrystallographic Research, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland.
Acta Crystallogr D Biol Crystallogr. 2012 Sep;68(Pt 9):1140-51. doi: 10.1107/S0907444912021555. Epub 2012 Aug 18.
Three crystal structures of a lipoprotein (Bmlp7) of unknown function, a member of the 30 kDa lipoprotein family from mulberry silkworm (Bombyx mori L.) haemolymph, have been determined. The 1.33 Å resolution structure is an excellent example of how a precise crystallographic study can contribute to protein identification. The correct sequence of this haemolymph-isolated protein was assigned thanks to superb-quality electron-density maps. Two unexpected cadmium cations were found in this crystal structure [Bmlp7-I(Cd)] and their presence may be connected to a detoxification mechanism in this insect. For a comparison of the metal-binding sites, the crystal structure of a platinum complex (Bmlp7-Pt) was also solved at 1.94 Å resolution. The third (2.50 Å resolution) structure, of the native protein harvested in a different season (Bmlp7-II), corresponds to a different polymorph with an altered pattern of intermolecular interactions and with a total absence of cadmium ions and highlights the possible involvement of Bmlp7 in the response to environmental pollution. The N-terminal domain of Bmlp7 has a fold resembling a clockwise spiral created by six helices and can be classified as a VHS domain. The C-terminal domain is folded as a β-trefoil. The biological function of Bmlp7 is unknown, but its structural homology to sugar-binding proteins suggests that, in analogy to other 30 kDa haemolymph lipoproteins, it could play a role as an anti-apoptotic factor or function in the immune response of the insect to fungal infections.
已确定了家蚕(Bombyx mori L.)血淋巴中30 kDa脂蛋白家族成员、功能未知的一种脂蛋白(Bmlp7)的三种晶体结构。分辨率为1.33 Å的结构是精确晶体学研究有助于蛋白质鉴定的一个绝佳例子。由于高质量的电子密度图,确定了这种从血淋巴中分离出的蛋白质的正确序列。在该晶体结构[Bmlp7-I(Cd)]中发现了两个意外的镉阳离子,它们的存在可能与这种昆虫的解毒机制有关。为了比较金属结合位点,还以1.94 Å的分辨率解析了铂配合物(Bmlp7-Pt)的晶体结构。第三个结构(分辨率为2.50 Å)是在不同季节收获的天然蛋白质(Bmlp7-II)的结构,它对应于一种不同的多晶型物,分子间相互作用模式改变,且完全没有镉离子,这突出了Bmlp7可能参与对环境污染的响应。Bmlp7的N端结构域具有由六个螺旋形成的类似顺时针螺旋的折叠,可归类为VHS结构域。C端结构域折叠成β-三叶形。Bmlp7的生物学功能尚不清楚,但其与糖结合蛋白的结构同源性表明,与其他30 kDa血淋巴脂蛋白类似,它可能作为抗凋亡因子发挥作用,或在昆虫对真菌感染的免疫反应中发挥作用。