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结核分枝杆菌琥珀酰二氨基庚二酸去琥珀酰化酶(Rv1202,DapE)的克隆、表达、纯化、结晶及初步X射线衍射分析

Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of succinyl-diaminopimelate desuccinylase (Rv1202, DapE) from Mycobacterium tuberculosis.

作者信息

Reinhard Linda, Mueller-Dieckmann Jochen, Weiss Manfred S

机构信息

EMBL Hamburg Outstation, c/o DESY, Notkestrasse 85, 22603 Hamburg, Germany.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Sep 1;68(Pt 9):1089-93. doi: 10.1107/S174430911203062X. Epub 2012 Aug 31.

Abstract

Succinyl-diaminopimelate desuccinylase from Mycobacterium tuberculosis (DapE, Rv1202) has been cloned, heterologously expressed in Escherichia coli and purified using standard chromatographic techniques. Diffraction-quality crystals were obtained at acidic pH from ammonium sulfate and PEG and diffraction data were collected from two crystals to resolutions of 2.40 and 2.58 Å, respectively. The crystals belonged to the monoclinic space group P2(1), with unit-cell parameters a = 79.7, b = 76.0, c = 82.9 Å, β = 119°. The most probable content of the asymmetric unit was two molecules of DapE, which would correspond to a solvent content of 56%. Both examined crystals turned out to be pseudo-merohedrally twinned, with twin operator -h, -k, h + l and twin fractions of approximately 0.46 and 0.16, respectively.

摘要

来自结核分枝杆菌的琥珀酰二氨基庚二酸脱琥珀酰酶(DapE,Rv1202)已被克隆,在大肠杆菌中进行异源表达,并使用标准色谱技术进行纯化。在酸性pH条件下,从硫酸铵和聚乙二醇中获得了衍射质量的晶体,并从两块晶体中分别收集了衍射数据,分辨率分别为2.40 Å和2.58 Å。晶体属于单斜空间群P2(1),晶胞参数为a = 79.7、b = 76.0、c = 82.9 Å,β = 119°。不对称单元中最可能的含量是两个DapE分子,这将对应于56%的溶剂含量。两块检测的晶体均为假旋转孪晶,孪晶算子为-h、-k、h + l,孪晶分数分别约为0.46和0.16。

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