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结核分枝杆菌异丙基苹果酸异构酶(Rv2987c)小亚基的克隆、表达、纯化、结晶及初步X射线衍射分析

Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of the small subunit of isopropylmalate isomerase (Rv2987c) from Mycobacterium tuberculosis.

作者信息

Karuppasamy Manikandan, Geerlof Arie, Schuldt Linda, Mueller-Dieckmann Christoph, Weiss Manfred S

机构信息

EMBL Hamburg Outstation, c/o DESY, Notkestrasse 85, D-22603 Hamburg, Germany.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Feb 1;65(Pt 2):136-9. doi: 10.1107/S1744309108042516. Epub 2009 Jan 31.

Abstract

Two C-terminally truncated variants of the small subunit of Mycobacterium tuberculosis isopropylmalate isomerase (Rv2987c; LeuD), LeuD_1-156 and LeuD_1-168, have been cloned, heterologously expressed in Escherichia coli, purified using standard chromatographic techniques and crystallized. The crystals of LeuD_1-156 belonged to the hexagonal system (space group P6(1)22 or P6(5)22) with up to four subunits in the asymmetric unit, whereas the crystals of LeuD_1-168 belonged to the monoclinic system (space group P2(1)) with two subunits in the asymmetric unit. Both crystals diffracted X-rays to beyond 2.0 A resolution and were suitable for further crystallographic analysis.

摘要

结核分枝杆菌异丙基苹果酸异构酶(Rv2987c;LeuD)小亚基的两个C末端截短变体LeuD_1-156和LeuD_1-168已被克隆,在大肠杆菌中进行异源表达,使用标准色谱技术纯化并结晶。LeuD_1-156的晶体属于六方晶系(空间群P6(1)22或P6(5)22),不对称单元中最多有四个亚基,而LeuD_1-168的晶体属于单斜晶系(空间群P2(1)),不对称单元中有两个亚基。两种晶体的X射线衍射分辨率均超过2.0 Å,适合进一步的晶体学分析。

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本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
The open-access high-throughput crystallization facility at EMBL Hamburg.
Acta Crystallogr D Biol Crystallogr. 2006 Dec;62(Pt 12):1446-52. doi: 10.1107/S0907444906038121. Epub 2006 Nov 23.
3
Protein production by auto-induction in high density shaking cultures.
Protein Expr Purif. 2005 May;41(1):207-34. doi: 10.1016/j.pep.2005.01.016.
4
The high-resolution Structure of LeuB (Rv2995c) from Mycobacterium tuberculosis.
J Mol Biol. 2005 Feb 11;346(1):1-11. doi: 10.1016/j.jmb.2004.11.059. Epub 2004 Dec 23.
6
Crystal structure of LeuA from Mycobacterium tuberculosis, a key enzyme in leucine biosynthesis.
Proc Natl Acad Sci U S A. 2004 Jun 1;101(22):8295-300. doi: 10.1073/pnas.0400820101. Epub 2004 May 24.
7
An analysis of some hypotheses related to the Chingelput bacille Calmette-Guérin trial.
Clin Infect Dis. 2000 Sep;31 Suppl 3:S77-80. doi: 10.1086/314073.
8
Attenuation of and protection induced by a leucine auxotroph of Mycobacterium tuberculosis.
Infect Immun. 2000 May;68(5):2888-98. doi: 10.1128/IAI.68.5.2888-2898.2000.
9
The Protein Data Bank.
Nucleic Acids Res. 2000 Jan 1;28(1):235-42. doi: 10.1093/nar/28.1.235.
10
SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model.
Acta Crystallogr D Biol Crystallogr. 1999 Jan;55(Pt 1):191-205. doi: 10.1107/S0907444998006684. Epub 1999 Jan 1.

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