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哺乳动物发育和癌症中的 10 种 11 号转位酶和 5-羟甲基化。

Ten eleven translocation enzymes and 5-hydroxymethylation in mammalian development and cancer.

机构信息

New England Biolabs, 240 County Road, Ipswich, MA 01938, USA.

出版信息

Adv Exp Med Biol. 2013;754:57-79. doi: 10.1007/978-1-4419-9967-2_3.

Abstract

5-Hydroxymethylcytosine (5hmC) is an oxidative product of 5-methylcytosine (5mC), catalyzed by the ten eleven translocation (TET) family of enzymes. Although 5hmC was discovered several decades ago, it was only after its recent identification in murine brain and stem cell DNA that it has become a major focus of epigenomic research. Part of the reason for this delay is due to the difficulty in detecting both global and locus-specific 5hmC levels. Several studies have addressed this issue with the development of novel techniques to locate and measure 5hmC, which led to multiple reports detailing 5hmC patterns in stem cells and global 5hmC levels during embryogenesis. Based on these studies of 5hmC levels and reports of tissue-specific TET expression, these enzymes are thought to play a role in mammalian development and differentiation. In addition, the TET enzymes are mutated in several types of cancer, affecting their activity and likely altering genomic 5hmC and 5mC patterns. Furthermore, oxidation of 5mC appears to be a step in several active DNA demethylation pathways, which may be important for normal processes, as well as global hypomethylation during cancer development and progression. Much has been revealed about this interesting DNA modification in recent years, but more research is needed for understanding the role of TET proteins and 5hmC in gene regulation and disease.

摘要

5-羟甲基胞嘧啶(5hmC)是 5-甲基胞嘧啶(5mC)的氧化产物,由 ten eleven translocation(TET)家族的酶催化产生。尽管 5hmC 几十年前就已被发现,但直到最近在鼠脑和干细胞 DNA 中鉴定出它,它才成为表观基因组学研究的主要焦点。这种延迟的部分原因是由于难以检测全局和局部 5hmC 水平。一些研究通过开发定位和测量 5hmC 的新方法解决了这个问题,这导致了多个详细报告,阐述了干细胞中的 5hmC 模式和胚胎发生过程中的全局 5hmC 水平。基于这些关于 5hmC 水平的研究和组织特异性 TET 表达的报告,这些酶被认为在哺乳动物的发育和分化中发挥作用。此外,几种类型的癌症中 TET 酶发生突变,影响其活性并可能改变基因组 5hmC 和 5mC 模式。此外,5mC 的氧化似乎是几种活性 DNA 去甲基化途径中的一个步骤,这对于正常过程以及癌症发展和进展过程中的全局低甲基化可能很重要。近年来,关于这种有趣的 DNA 修饰已经有了很多发现,但为了理解 TET 蛋白和 5hmC 在基因调控和疾病中的作用,还需要更多的研究。

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