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来自两座不同喜马拉雅亚冰川湖的低温活性产水解酶细菌。

Cold-active hydrolases producing bacteria from two different sub-glacial Himalayan lakes.

机构信息

National Bureau of Agriculturally Important Microorganisms (NBAIM), Kusmaur, Mau, Uttar Pradesh, India.

出版信息

J Basic Microbiol. 2013 Aug;53(8):703-14. doi: 10.1002/jobm.201200126. Epub 2012 Sep 7.

Abstract

Microorganisms, native to the cold environments have successfully acclimatized their physiological, metabolic, and biological features, exhibiting uniqueness in their enzymes, proteins, and membrane structures. These cold-active enzymes have immense biotechnological potential. The diversity of culturable bacteria in two different water lakes (the sub-glacial freshwater and the brackish) of Himalayas was analyzed using SYBR green staining and cultural methods. A total of 140 bacteria were isolated and were grouped as psychrophiles, psychrotrophs, and psychrotolerant organisms, based on their optimal temperature for growth. The amplified ribosomal DNA restriction analysis using three restriction enzymes facilitated the grouping of these isolates into 96 genotypes at ≥85% polymorphism. Phylogenetic analysis using 16S rRNA gene sequences revealed that the bacterial strains from both lakes belonged to Firmicutes, Proteobacteria (α, β, and γ) or Actinobacteria. Screening of the germplasm for the activity of different cold-active hydrolases such as protease, amylase, xylanase, and cellulase, revealed that about 16 isolates were positive, and exhibiting a wide range of stability at various temperature and pH. Our results suggest that the distinctly different ecosystems of sub-glacial freshwater and brackish water lakes have diverse groups of bacteria, which can be an excellent source of extracellular hydrolases with a wide range of thermal stability.

摘要

微生物是源自寒冷环境的生物,它们成功地适应了生理、代谢和生物特征,在酶、蛋白质和膜结构方面具有独特性。这些低温活性酶具有巨大的生物技术潜力。本研究使用 SYBR 绿色染色和培养方法分析了喜马拉雅山两个不同湖泊(冰川下淡水湖和咸水湖)中可培养细菌的多样性。共分离出 140 株细菌,根据其最佳生长温度将其分为嗜冷菌、嗜冷菌和耐冷菌。使用三种限制性内切酶对扩增的核糖体 DNA 进行限制分析,将这些分离物分为 96 种基因型,具有≥85%的多态性。基于 16S rRNA 基因序列的系统发育分析表明,来自两个湖泊的细菌菌株属于厚壁菌门、变形菌门(α、β和γ)或放线菌门。对不同低温活性水解酶(如蛋白酶、淀粉酶、木聚糖酶和纤维素酶)活性的种质筛选表明,约有 16 株为阳性,并且在不同温度和 pH 值下表现出广泛的稳定性。我们的研究结果表明,冰川下淡水湖和咸水湖截然不同的生态系统中有多种细菌群,它们是具有广泛热稳定性的细胞外水解酶的极好来源。

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