Department of Chemistry, Division of Biochemistry, Vienna Institute of BioTechnology at BOKU - University of Natural Resources and Life Sciences, Muthgasse 18, A-1190 Vienna.
Chem Biodivers. 2012 Sep;9(9):1776-93. doi: 10.1002/cbdv.201100438.
Peroxidasins represent the subfamily 2 of the peroxidase-cyclooxygenase superfamily and are closely related to chordata peroxidases (subfamily 1) and peroxinectins (subfamily 3). They are multidomain proteins containing a heme peroxidase domain with high homology to human lactoperoxidase that mediates one- and two-electron oxidation reactions. Additional domains of the secreted and glycosylated metalloproteins are type C-like immunoglobulin domains, typical leucine-rich repeats, as well as a von Willebrand factor C module. These are typical motifs of extracellular proteins that mediate protein-protein interactions. We have reconstructed the phylogeny of this new family of oxidoreductases and show the presence of four invertebrate clades as well as one vertebrate clade that includes also two different human representatives. The variability of domain assembly in the various clades was analyzed, as was the occurrence of relevant catalytic residues in the peroxidase domain based on the knowledge of catalysis of the mammalian homologues. Finally, the few reports on expression, localization, enzymatic activity, and physiological roles in the model organisms Drosophila melanogaster, Caenorhabditis elegans, and Homo sapiens are critically reviewed. Roles attributed to peroxidasins include antimicrobial defense, extracellular matrix formation, and consolidation at various developmental stages. Many research questions need to be solved in future, including detailed biochemical/physical studies and elucidation of the three dimensional structure of a model peroxidasin as well as the relation and interplay of the domains and the in vivo functions in various organisms including man.
过氧化物酶体包含过氧化物酶-环加氧酶超家族的亚家族 2,与脊索动物过氧化物酶(亚家族 1)和过氧化物酶连接蛋白(亚家族 3)密切相关。它们是多结构域蛋白,包含与人类乳过氧化物酶高度同源的血红素过氧化物酶结构域,介导单电子和双电子氧化反应。分泌和糖基化金属蛋白酶的其他结构域是 C 型免疫球蛋白结构域、典型的亮氨酸丰富重复序列以及血管性血友病因子 C 模块。这些是介导蛋白质-蛋白质相互作用的细胞外蛋白的典型基序。我们重建了这个新的氧化还原酶家族的系统发育,显示了四个无脊椎动物分支以及一个包括两个不同人类代表的脊椎动物分支的存在。分析了不同分支中结构域组装的变异性,以及基于对哺乳动物同源物催化作用的了解,在过氧化物酶结构域中存在相关催化残基的情况。最后,对在模式生物果蝇、秀丽隐杆线虫和人类中表达、定位、酶活性和生理作用的少数报道进行了批判性评价。归因于过氧化物酶体的作用包括抗微生物防御、细胞外基质形成和在各个发育阶段的巩固。未来需要解决许多研究问题,包括详细的生化/物理研究和模型过氧化物酶体的三维结构的阐明,以及各个生物体(包括人类)中结构域的关系和相互作用以及体内功能。