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通过电子顺磁共振(EPR)和高分辨超精细相干谱(HYSCORE)光谱揭示的[FeFe]-氢化酶成熟蛋白HydF的[4Fe-4S]簇配位。

The [4Fe-4S]-cluster coordination of [FeFe]-hydrogenase maturation protein HydF as revealed by EPR and HYSCORE spectroscopies.

作者信息

Berto Paola, Di Valentin Marilena, Cendron Laura, Vallese Francesca, Albertini Marco, Salvadori Enrico, Giacometti Giorgio M, Carbonera Donatella, Costantini Paola

机构信息

Department of Biology, University of Padova, Viale G. Colombo 3, 35131 Padova, Italy.

出版信息

Biochim Biophys Acta. 2012 Dec;1817(12):2149-57. doi: 10.1016/j.bbabio.2012.09.004. Epub 2012 Sep 14.

Abstract

[FeFe] hydrogenases are key enzymes for bio(photo)production of molecular hydrogen, and several efforts are underway to understand how their complex active site is assembled. This site contains a [4Fe-4S]-2Fe cluster and three conserved maturation proteins are required for its biosynthesis. Among them, HydF has a double task of scaffold, in which the dinuclear iron precursor is chemically modified by the two other maturases, and carrier to transfer this unit to a hydrogenase containing a preformed [4Fe-4S]-cluster. This dual role is associated with the capability of HydF to bind and dissociate an iron-sulfur center, due to the presence of the conserved FeS-cluster binding sequence CxHx(46-53)HCxxC. The recently solved three-dimensional structure of HydF from Thermotoga neapolitana described the domain containing the three cysteines which are supposed to bind the FeS cluster, and identified the position of two conserved histidines which could provide the fourth iron ligand. The functional role of two of these cysteines in the activation of [FeFe]-hydrogenases has been confirmed by site-specific mutagenesis. On the other hand, the contribution of the three cysteines to the FeS cluster coordination sphere is still to be demonstrated. Furthermore, the potential role of the two histidines in [FeFe]-hydrogenase maturation has never been addressed, and their involvement as fourth ligand for the cluster coordination is controversial. In this work we combined site-specific mutagenesis with EPR (electron paramagnetic resonance) and HYSCORE (hyperfine sublevel correlation spectroscopy) to assign a role to these conserved residues, in both cluster coordination and hydrogenase maturation/activation, in HydF proteins from different microorganisms.

摘要

[FeFe]氢化酶是生物(光)制氢的关键酶,目前正在进行多项研究以了解其复杂的活性位点是如何组装的。该位点包含一个[4Fe-4S]-2Fe簇,其生物合成需要三种保守的成熟蛋白。其中,HydF具有双重作用,既是支架,二核铁前体在其中被另外两种成熟酶进行化学修饰,又是载体,将该单元转移到含有预先形成的[4Fe-4S]簇的氢化酶上。由于存在保守的FeS簇结合序列CxHx(46-53)HCxxC,这种双重作用与HydF结合和解离铁硫中心的能力相关。最近解析的那不勒斯嗜热栖热菌HydF的三维结构描述了包含三个假定结合FeS簇的半胱氨酸的结构域,并确定了两个保守组氨酸的位置,它们可能提供第四个铁配体。通过定点诱变已证实其中两个半胱氨酸在[FeFe]氢化酶激活中的功能作用。另一方面,这三个半胱氨酸对FeS簇配位球的贡献仍有待证明。此外,这两个组氨酸在[FeFe]氢化酶成熟中的潜在作用从未被探讨过,它们作为簇配位的第四个配体的参与存在争议。在这项工作中,我们将定点诱变与电子顺磁共振(EPR)和超精细亚能级相关光谱(HYSCORE)相结合,以确定这些保守残基在不同微生物的HydF蛋白的簇配位以及氢化酶成熟/激活中的作用。

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