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氢化酶成熟酶HydF上的一个氧化还原活性[2Fe-2S]簇。

A Redox Active [2Fe-2S] Cluster on the Hydrogenase Maturase HydF.

作者信息

Shepard Eric M, Byer Amanda S, Betz Jeremiah N, Peters John W, Broderick Joan B

机构信息

Department of Chemistry and Biochemistry, Montana State University , Bozeman, Montana 59717, United States.

出版信息

Biochemistry. 2016 Jun 28;55(25):3514-27. doi: 10.1021/acs.biochem.6b00528. Epub 2016 Jun 14.

Abstract

[FeFe]-hydrogenases are nature's most prolific hydrogen catalysts, excelling at facilely interconverting H2 and protons. The catalytic core common to all [FeFe]-hydrogenases is a complex metallocofactor, referred to as the H-cluster, which is composed of a standard [4Fe-4S] cluster linked through a bridging thiolate to a 2Fe subcluster harboring dithiomethylamine, carbon monoxide, and cyanide ligands. This 2Fe subcluster is synthesized and inserted into [FeFe]-hydrogenase by three maturase enzymes denoted HydE, HydF, and HydG. HydE and HydG are radical S-adenosylmethionine enzymes and synthesize the nonprotein ligands of the H-cluster. HydF is a GTPase that functions as a scaffold or carrier for 2Fe subcluster production. Herein, we utilize UV-visible, circular dichroism, and electron paramagnetic resonance spectroscopic studies to establish the existence of redox active [4Fe-4S] and [2Fe-2S] clusters bound to HydF. We have used spectroelectrochemical titrations to assign iron-sulfur cluster midpoint potentials, have shown that HydF purifies with a reduced [2Fe-2S] cluster in the absence of exogenous reducing agents, and have tracked iron-sulfur cluster spectroscopic changes with quaternary structural perturbations. Our results provide an important foundation for understanding the maturation process by defining the iron-sulfur cluster content of HydF prior to its interaction with HydE and HydG. We speculate that the [2Fe-2S] cluster of HydF either acts as a placeholder for HydG-derived Fe(CO)2CN species or serves as a scaffold for 2Fe subcluster assembly.

摘要

[铁铁]氢化酶是自然界中最多产的氢催化剂,擅长于轻松地将氢气和质子相互转化。所有[铁铁]氢化酶共有的催化核心是一种复杂的金属辅因子,称为H簇,它由一个标准的[4铁-4硫]簇通过一个桥连硫醇盐连接到一个含有二硫代甲胺、一氧化碳和氰化物配体的2铁亚簇组成。这个2铁亚簇由三种成熟酶HydE、HydF和HydG合成并插入到[铁铁]氢化酶中。HydE和HydG是自由基S-腺苷甲硫氨酸酶,负责合成H簇的非蛋白质配体。HydF是一种GTP酶,作为2铁亚簇产生的支架或载体发挥作用。在此,我们利用紫外可见光谱、圆二色光谱和电子顺磁共振光谱研究来确定与HydF结合的氧化还原活性[4铁-4硫]和[2铁-2硫]簇的存在。我们使用光谱电化学滴定来确定铁硫簇的中点电位,表明在没有外源还原剂的情况下,HydF纯化时带有一个还原的[2铁-2硫]簇,并跟踪了铁硫簇光谱随四级结构扰动的变化。我们的结果通过定义HydF在与HydE和HydG相互作用之前的铁硫簇含量,为理解成熟过程提供了重要基础。我们推测HydF的[2铁-2硫]簇要么作为HydG衍生的Fe(CO)2CN物种的占位符,要么作为2铁亚簇组装的支架。

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