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北美的蛭形蚓目(环节动物门:寡毛纲)的分子系统发育。

Molecular phylogeny of North American Branchiobdellida (Annelida: Clitellata).

机构信息

Department of Biological Sciences, University of Alberta, Edmonton, AB, Canada T6G 2E9.

出版信息

Mol Phylogenet Evol. 2013 Jan;66(1):30-42. doi: 10.1016/j.ympev.2012.09.002. Epub 2012 Sep 17.

Abstract

Branchiobdellidans, or crayfish worms, are ectosymbiotic clitellate annelids associated primarily with freshwater crayfishes. The main objectives of our study were to infer a molecular phylogeny for the North American Branchiobdellida, examine its congruence with morphology-based hypotheses of relationships at the subfamily and genus level, and use our dataset to assess consistency of GenBank-archived branchiobdellidan sequences. We used nucleotide sequence data from two mtDNA genes (COI and 16S rDNA) and three nuclear genes (28S rDNA, 18S rDNA, and ITS1) to estimate phylogenetic relationships among 47 described and one undescribed species of Branchiobdellida. We recovered a monophyletic branchiobdellidan clade with generally short branch lengths, suggesting that a large portion of the taxon has likely undergone a recent and rapid radiation in North America. Results from our phylogenetic analyses indicate that current taxonomic groupings are largely unsupported by the molecular data. All four subfamilies are either paraphyletic or polyphyletic, and only three of seven sampled non-monotypic genera were monophyletic. We found a high rate (49%) of inconsistency in GenBank-archived sequences, over 70% of which can be attributed to field- or laboratory-based error.

摘要

蛭形蚓目,或小龙虾虫,是外共生具刚毛的环节动物,主要与淡水小龙虾有关。我们研究的主要目的是推断北美的蛭形蚓目分子系统发育,检验其与基于形态的亚科和属水平关系假说的一致性,并利用我们的数据集评估 GenBank 存档的蛭形蚓目序列的一致性。我们使用来自两个 mtDNA 基因(COI 和 16S rDNA)和三个核基因(28S rDNA、18S rDNA 和 ITS1)的核苷酸序列数据来估计 47 种已描述和 1 种未描述的蛭形蚓目的系统发育关系。我们恢复了一个单系的蛭形蚓目分支,其分支长度通常较短,表明该分类群的很大一部分可能在北美经历了最近和快速的辐射。我们的系统发育分析结果表明,目前的分类群在很大程度上不受分子数据的支持。所有四个亚科要么是并系的,要么是多系的,只有七个取样的非单型属中的三个是单系的。我们发现 GenBank 存档序列的不一致率很高(49%),其中超过 70%的序列可以归因于基于现场或实验室的错误。

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