Structural Biology & Bio-Informatics Division, Indian Institute of Chemical Biology, Kolkata-700 032, India.
J Phys Chem B. 2012 Oct 18;116(41):12489-500. doi: 10.1021/jp307526f. Epub 2012 Oct 8.
MPT63, a secreted protein of unknown function that is specific to Mycobacterium tuberculosis and a potential drug target, contains four Tryptophan (Trp/W) residues located at positions 26, 48, 82, and 129 in the amino acid sequence. All of the four Trp residues have been optically resolved by simple inexpensive phosphorescence spectroscopy at 77 K. The protein architecture provides a delicate micro-environment and location of Trp residues giving rise to four different (0,0) bands in the phosphorescence spectra. Calculation of intra Trp energy transfer (ET) efficiency, accessible surface area (ASA) of Trp residues, and environment of Trp in the wild-type (WT) and the mutant W26F [where, Trp 26 is replaced by phenyl alanine (Phe/F)] reveal: E(T1) (W82) > E(T1) (W48) > E(T1) (W129) > E(T1) (W26), where E(T1) is the lowest (π-π*) triplet state energy of Trp. The (0,0) band observed at 421.6 nm assigned for Trp 26 is found to be the longest wavelength (0,0) band so far reported in the literature. Fluorescence in WT and W26F is dominated by buried or partially exposed Trp residues indicated by time-resolved spectra. Circular Dichroism (CD) studies and the time-resolved anisotropy measurement confirm the unaltered secondary and tertiary structure of the mutant compared to that of the WT. Excitation energy dependent phosphorescence spectra suggest that the intensity of the different (0,0) bands could be tuned and Tyrosine (Tyr/Y) residue is silent in emission. Optical resolution of all the Trp residues will help understand the role of each Trp residue in the folding/unfolding mechanism and in the interaction with other systems.
MPT63 是一种分泌蛋白,其功能未知,是结核分枝杆菌所特有的,可能是一种潜在的药物靶点。该蛋白含有 4 个色氨酸(Trp/W)残基,位于氨基酸序列的 26、48、82 和 129 位。所有 4 个色氨酸残基均通过简单且廉价的 77 K 磷光光谱学得以明确分辨。该蛋白结构提供了精致的微观环境和色氨酸残基的位置,导致磷光光谱中出现了四个不同的(0,0)带。计算色氨酸残基的内能量转移(ET)效率、可及表面积(ASA)和野生型(WT)和突变体 W26F(其中,色氨酸 26 被苯丙氨酸(Phe/F)取代)中色氨酸的环境表明:E(T1)(W82)>E(T1)(W48)>E(T1)(W129)>E(T1)(W26),其中 E(T1) 是色氨酸最低的(π-π*)三重态能量。在文献中迄今报道的最长波长(0,0)带中,观察到 421.6nm 处的(0,0)带分配给色氨酸 26。WT 和 W26F 的荧光主要由埋藏或部分暴露的色氨酸残基主导,这表明时间分辨光谱。圆二色性(CD)研究和时间分辨各向异性测量证实了与 WT 相比,突变体的二级和三级结构没有改变。激发能量依赖的磷光光谱表明,不同(0,0)带的强度可以进行调节,并且色氨酸残基在发射中是沉默的。所有色氨酸残基的光学分辨将有助于了解每个色氨酸残基在折叠/去折叠机制中的作用以及与其他系统的相互作用。