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用于研究天然无序蛋白质(IDPs)的专性异核(13)C 检测的氨基酸选择性 NMR 实验。

Exclusively heteronuclear (13) C-detected amino-acid-selective NMR experiments for the study of intrinsically disordered proteins (IDPs).

机构信息

Bruker BioSpin GmbH, 76287 Rheinstetten, Germany.

出版信息

Chembiochem. 2012 Nov 5;13(16):2425-32. doi: 10.1002/cbic.201200447. Epub 2012 Oct 11.

Abstract

Carbon-13 direct-detection NMR methods have proved to be very useful for the characterization of intrinsically disordered proteins (IDPs). Here we present a suite of experiments in which amino-acid-selective editing blocks are encoded in CACON- and CANCO-type sequences to give (13) C-detected spectra containing correlations arising from a particular type or group of amino acid(s). These two general types of experiments provide the complementary intra- and inter-residue correlations necessary for sequence-specific assignment of backbone resonance frequencies. We demonstrate the capabilities of these experiments on two IDPs: fully reduced Cox17 and WIP(C) . The proposed approach constitutes an independent strategy to simplify crowded spectra as well as to perform sequence-specific assignment, thereby demonstrating its potential to study IDPs.

摘要

碳-13 直接检测 NMR 方法已被证明对天然无序蛋白质 (IDP) 的特征描述非常有用。在此,我们提出了一系列实验方案,其中在 CACON-和 CANCO 型序列中编码氨基酸选择性编辑块,以提供包含特定类型或组氨基酸的 (13) C 检测谱。这两种通用类型的实验提供了必需的序列特异性残基内和残基间相关性,以确定骨架共振频率。我们在两个 IDP 上展示了这些实验的能力:完全还原的 Cox17 和 WIP(C)。所提出的方法构成了简化拥挤谱以及进行序列特异性分配的独立策略,从而证明了其研究 IDP 的潜力。

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