Love Ian M, Shi Dingding, Grossman Steven R
Department of Internal Medicine, Virginia Commonwealth University, Richmond, VA, USA.
Methods Mol Biol. 2013;962:63-73. doi: 10.1007/978-1-62703-236-0_5.
p53 levels and activity are controlled in large part through regulated ubiquitination and subsequent destruction by the 26S proteasome. Monoubiquitination of p53 is mediated primarily by the RING-finger E3 ubiquitin ligase MDM2 and impacts p53 activity through modulation of p53 localization and transcription activities. Recently, several E4 ubiquitin ligases (E4s) have been identified which serve to extend these monoubiquitin chains. The ubiquitin ligase activity of these factors toward p53, and their contribution to p53 degradation, can be studied using a variety of in vitro and in vivo methods and reagents which will be described in this chapter. These methods include in vivo ubiquitination of p53 using HA-ubiquitin or his-ubiquitin; the in vitro E3 ubiquitin ligase assay, in which ubiquitin reaction components (URC) are incubated with a purified E3 or E4 ligase; a one-step E4 assay, in which URC are incubated with a substrate, E3, and E4; and a two-step E4 assay in which p53 is monoubiquitinated in an E3 reaction, and subsequently purified and incubated with an E4. Finally, we will describe an in vitro degradation assay in which ubiquitinated p53 is incubated with purified 26S proteasomes. Together, these assays can be used to provide insight into the biochemical nature of p53 ubiquitination and degradation.
p53的水平和活性在很大程度上是通过调控泛素化以及随后被26S蛋白酶体降解来控制的。p53的单泛素化主要由具有RING结构域的E3泛素连接酶MDM2介导,并通过调节p53的定位和转录活性来影响p53的活性。最近,已鉴定出几种E4泛素连接酶(E4),它们可用于延长这些单泛素链。这些因子对p53的泛素连接酶活性及其对p53降解的作用,可以使用本章将要描述的各种体外和体内方法及试剂来进行研究。这些方法包括使用HA-泛素或his-泛素在体内对p53进行泛素化;体外E3泛素连接酶测定,即将泛素反应成分(URC)与纯化的E3或E4连接酶一起孵育;一步法E4测定,即将URC与底物、E3和E4一起孵育;以及两步法E4测定,即在E3反应中对p53进行单泛素化,随后纯化并与E4一起孵育。最后,我们将描述一种体外降解测定方法,即将泛素化的p53与纯化的26S蛋白酶体一起孵育。总之,这些测定方法可用于深入了解p53泛素化和降解的生化本质。