Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, 106 Nanjing Road, Qingdao, Shandong 266071, China.
J Virol Methods. 2013 Feb;187(2):384-9. doi: 10.1016/j.jviromet.2012.11.005. Epub 2012 Nov 14.
Reverse transcription loop-mediated isothermal amplification (RT-LAMP) is a gene amplification method that can amplify the RNA template by isothermal incubation. This paper reports a rapid and sensitive RT-LAMP method which was developed for the detection of grass carp reovirus (GCRV). The present study concluded the optimal conditions for the LAMP reaction of which the Mg(2+) concentrations in the reaction mixtures, the incubation temperature, and the reaction time are at 8mM, 64°C, and 30 min, respectively. The analytical sensitivity of the RT-LAMP method was revealed as low as 7 copies of viral templates and 100-fold more sensitive than the published RT-PCR method. A visual inspection of in-tube LAMP products stained with a DNA fluorescent dye demonstrated that the positive and negative reactions exhibit distinct and different colors in daylight, which means that gel electrophoresis is not necessary to judge the positive or negative results. As the application of the method is rapid, easy, and no complicated instrument required, the GCRV-RT-LAMP method established in this study has great potential for the detection of GCRV in both the laboratory and the farm.
逆转录环介导等温扩增(RT-LAMP)是一种基因扩增方法,可以通过等温孵育扩增 RNA 模板。本文报道了一种快速灵敏的 RT-LAMP 方法,用于检测草鱼呼肠孤病毒(GCRV)。本研究确定了 LAMP 反应的最佳条件,其中反应混合物中的 Mg(2+)浓度、孵育温度和反应时间分别为 8mM、64°C 和 30 分钟。RT-LAMP 方法的分析灵敏度低至 7 个病毒模板拷贝,比已发表的 RT-PCR 方法灵敏 100 倍。用 DNA 荧光染料对管内 LAMP 产物进行目视检查表明,阳性和阴性反应在日光下呈现出明显不同的颜色,这意味着无需进行凝胶电泳即可判断阳性或阴性结果。由于该方法快速、简便,且不需要复杂的仪器,因此本研究中建立的 GCRV-RT-LAMP 方法在实验室和养殖场检测 GCRV 具有很大的潜力。