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APLF 促进非同源末端连接蛋白复合物的组装和活性。

APLF promotes the assembly and activity of non-homologous end joining protein complexes.

机构信息

Genome Damage and Stability Centre, University of Sussex, Brighton, UK.

出版信息

EMBO J. 2013 Jan 9;32(1):112-25. doi: 10.1038/emboj.2012.304. Epub 2012 Nov 23.

DOI:10.1038/emboj.2012.304
PMID:23178593
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3545299/
Abstract

Non-homologous end joining (NHEJ) is critical for the maintenance of genetic integrity and DNA double-strand break (DSB) repair. NHEJ is regulated by a series of interactions between core components of the pathway, including Ku heterodimer, XLF/Cernunnos, and XRCC4/DNA Ligase 4 (Lig4). However, the mechanisms by which these proteins assemble into functional protein-DNA complexes are not fully understood. Here, we show that the von Willebrand (vWA) domain of Ku80 fulfills a critical role in this process by recruiting Aprataxin-and-PNK-Like Factor (APLF) into Ku-DNA complexes. APLF, in turn, functions as a scaffold protein and promotes the recruitment and/or retention of XRCC4-Lig4 and XLF, thereby assembling multi-protein Ku complexes capable of efficient DNA ligation in vitro and in cells. Disruption of the interactions between APLF and either Ku80 or XRCC4-Lig4 disrupts the assembly and activity of Ku complexes, and confers cellular hypersensitivity and reduced rates of chromosomal DSB repair in avian and human cells, respectively. Collectively, these data identify a role for the vWA domain of Ku80 and a molecular mechanism by which DNA ligase proficient complexes are assembled during NHEJ in mammalian cells, and reveal APLF to be a structural component of this critical DSB repair pathway.

摘要

非同源末端连接(NHEJ)对于维持遗传完整性和修复 DNA 双链断裂(DSB)至关重要。NHEJ 受到途径核心成分之间一系列相互作用的调节,包括 Ku 异二聚体、XLF/Cernunnos 和 XRCC4/DNA 连接酶 4(Lig4)。然而,这些蛋白质组装成功能性蛋白-DNA 复合物的机制尚不完全清楚。在这里,我们表明 Ku80 的 von Willebrand (vWA) 结构域通过将 Aprataxin-and-PNK-Like Factor (APLF) 招募到 Ku-DNA 复合物中,在这个过程中起着关键作用。APLF 反过来又作为支架蛋白,促进 XRCC4-Lig4 和 XLF 的募集和/或保留,从而组装能够在体外和细胞中有效进行 DNA 连接的多蛋白 Ku 复合物。破坏 APLF 与 Ku80 或 XRCC4-Lig4 之间的相互作用会破坏 Ku 复合物的组装和活性,并分别导致禽类和人类细胞的细胞敏感性增加和染色体 DSB 修复率降低。总之,这些数据确定了 Ku80 的 vWA 结构域的作用以及在哺乳动物细胞中进行 NHEJ 时 DNA 连接酶功能复合物组装的分子机制,并揭示了 APLF 是这个关键 DSB 修复途径的结构组成部分。

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Nucleic Acids Res. 2012 Sep 1;40(17):8371-80. doi: 10.1093/nar/gks622. Epub 2012 Jun 26.
2
Polynucleotide kinase and aprataxin-like forkhead-associated protein (PALF) acts as both a single-stranded DNA endonuclease and a single-stranded DNA 3' exonuclease and can participate in DNA end joining in a biochemical system.多核苷酸激酶和 aprataxin 样叉头相关蛋白 (PALF) 既是单链 DNA 内切核酸酶,也是单链 DNA 3' 外切核酸酶,可在生化系统中参与 DNA 末端连接。
J Biol Chem. 2011 Oct 21;286(42):36368-77. doi: 10.1074/jbc.M111.287797. Epub 2011 Sep 1.
3
PARP regulates nonhomologous end joining through retention of Ku at double-strand breaks.聚腺苷二磷酸核糖聚合酶通过保持双链断裂处的 Ku 来调节非同源末端连接。
J Cell Biol. 2011 Aug 8;194(3):367-75. doi: 10.1083/jcb.201012132. Epub 2011 Aug 1.
4
Functional significance of the interaction with Ku in DNA double-strand break recognition of XLF.XLF 在 DNA 双链断裂识别中与 Ku 相互作用的功能意义。
FEBS Lett. 2011 Mar 23;585(6):841-6. doi: 10.1016/j.febslet.2011.02.020. Epub 2011 Feb 22.
5
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Mol Cell. 2011 Jan 7;41(1):46-55. doi: 10.1016/j.molcel.2010.12.008.
6
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Mol Cell. 2011 Jan 7;41(1):33-45. doi: 10.1016/j.molcel.2010.12.006.
7
Structure and identification of ADP-ribose recognition motifs of APLF and role in the DNA damage response.ADP-ribose 识别基序的结构与鉴定及其在 DNA 损伤反应中的作用。
Proc Natl Acad Sci U S A. 2010 May 18;107(20):9129-34. doi: 10.1073/pnas.1000556107. Epub 2010 May 3.
8
The mechanism of double-strand DNA break repair by the nonhomologous DNA end-joining pathway.非同源 DNA 末端连接途径修复双链 DNA 断裂的机制。
Annu Rev Biochem. 2010;79:181-211. doi: 10.1146/annurev.biochem.052308.093131.
9
gammaH2AX foci analysis for monitoring DNA double-strand break repair: strengths, limitations and optimization.γH2AX 焦点分析监测 DNA 双链断裂修复:优势、局限性和优化。
Cell Cycle. 2010 Feb 15;9(4):662-9. doi: 10.4161/cc.9.4.10764. Epub 2010 Mar 2.
10
Solution structures of the two PBZ domains from human APLF and their interaction with poly(ADP-ribose).人 APLF 中两个 PBZ 结构域的溶液结构及其与多聚(ADP-核糖)的相互作用。
Nat Struct Mol Biol. 2010 Feb;17(2):241-3. doi: 10.1038/nsmb.1747. Epub 2010 Jan 24.