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复杂 DNA 多面体链的辫子指数。

The braid index of complicated DNA polyhedral links.

机构信息

Department of Mathematics, Huizhou University, Huizhou, Guangdong, PR China.

出版信息

PLoS One. 2012;7(11):e48968. doi: 10.1371/journal.pone.0048968. Epub 2012 Nov 20.

Abstract

The goal of this paper is to determine the braid index of two types of complicated DNA polyhedral links introduced by chemists and biologists in recent years. We shall study it in a more broad context and actually consider so-called Jaeger's links (more general Traldi's links) which contain, as special cases, both four types of simple polyhedral links whose braid indexes have been determined and the above two types of complicated DNA polyhedral links. Denote by b(L) and c(L) the braid index and crossing number of an oriented link L, respectively. Roughly speaking, in this paper, we prove that b(L) = c(L)/2 + 1 for any link L in a family including Jaeger's links and contained in Traldi's links, which is obtained by combining the MFW inequality and an Ohyama's result on upper bound of the braid index. Our result may be used to to characterize and analyze the structure and complexity of DNA polyhedra and entanglement in biopolymers.

摘要

本文旨在确定近年来化学家及生物学家引入的两种复杂 DNA 多面体链的纽结指数。我们将在更广泛的背景下进行研究,并实际考虑所谓的 Jaeger 链(更一般的 Traldi 链),它包含作为特例的四种简单多面体链,这些链的纽结指数已经确定,以及上述两种复杂 DNA 多面体链。设 b(L) 和 c(L) 分别为有向链 L 的纽结指数和交叉数。大致来说,本文通过结合 MFW 不等式和 Ohyama 关于纽结指数上界的结果,证明了对于包括 Jaeger 链在内的 Traldi 链中的任意链 L,b(L) = c(L)/2 + 1。我们的结果可用于描述和分析 DNA 多面体的结构和复杂性以及生物聚合物中的缠结。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4fef/3502409/059e1ba516bb/pone.0048968.g001.jpg

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