Nariman R Battulin, Anna A Khabarova, Aleksey G Menzorov, Oleg L Serov, Institute of Cytology and Genetics SD RAS, Lavrentyeva 10, Novosibirsk 630090, Russian.
World J Stem Cells. 2012 Aug 26;4(8):87-93. doi: 10.4252/wjsc.v4.i8.87.
To examine the imprinted Dlk1-Dio3 locus in pluripotent embryonic stem (ES) cell/fibroblast hybrid cells.
Gtl2, Rian, and Mirg mRNA expression in mouse pluripotent ES cell/fibroblast hybrid cells was examined by real-time reverse transcription-polymerase chain reaction. Pyrosequencing and bisulfate sequencing were used to determine the DNA methylation level of the Dlk1-Dio3 locus imprinting control region.
The selected hybrid clones had a near-tetraploid karyotype and were highly pluripotent judging from their capacity to generate chimeric embryos and adult chimeras. Our data clearly demonstrate that Gtl2, Rian, and Mirg, which are imprinted genes within the Dlk1-Dio3 locus, are active in all examined ES cell/fibroblast hybrid clones. In spite of interclonal variability, the expression of the imprinted genes is comparable to that of ES cells and fibroblasts. Quantitative analysis of the DNA methylation status of the intergenic differentially methylated region (IG DMR) within the Dlk1-Dio3 locus by pyrosequencing and bisulfite sequencing clearly showed that the DNA methylation status of the imprinted region in the tested hybrid clones was comparable to that of both ES cells and fibroblasts.
Reprogramming process in a hybrid cell system is achieved without marked alteration of the imprinted Dlk1-Dio3 locus.
研究多能胚胎干细胞(ES)/成纤维细胞杂交细胞中的印记 Dlk1-Dio3 基因座。
通过实时逆转录-聚合酶链反应检测小鼠多能 ES 细胞/成纤维细胞杂交细胞中的 Gtl2、Rian 和 Mirg mRNA 表达。焦磷酸测序和亚硫酸氢盐测序用于确定 Dlk1-Dio3 基因座印迹控制区的 DNA 甲基化水平。
所选杂交克隆具有近四倍体核型,从其生成嵌合胚胎和成年嵌合体的能力来看,具有高度多能性。我们的数据清楚地表明,Dlk1-Dio3 基因座内的印记基因 Gtl2、Rian 和 Mirg 在所有检测到的 ES 细胞/成纤维细胞杂交克隆中均为活跃状态。尽管存在克隆间变异性,但印记基因的表达与 ES 细胞和成纤维细胞相当。焦磷酸测序和亚硫酸氢盐测序对 Dlk1-Dio3 基因座间基因差异甲基化区(IG DMR)的 DNA 甲基化状态进行定量分析,清楚地表明,测试杂交克隆中印记区域的 DNA 甲基化状态与 ES 细胞和成纤维细胞相当。
在杂交细胞系统中,重编程过程没有明显改变印记的 Dlk1-Dio3 基因座。