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人凋亡蛋白酶激活因子1相互作用蛋白的结晶及初步X射线晶体学分析

Crystallization and preliminary X-ray crystallographic analysis of human Apaf-1-interacting protein.

作者信息

Kang Wonchull, Yang Jin Kuk

机构信息

Department of Chemistry, College of Natural Sciences, Soongsil University, Seoul 156-743, Republic of Korea.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Dec 1;68(Pt 12):1518-20. doi: 10.1107/S1744309112042832. Epub 2012 Nov 14.

Abstract

Apaf-1-interacting protein (APIP) is known to inhibit two different types of cell death: caspase-1-dependent pyroptosis and caspase-9-dependent apoptosis. APIP is also involved in the methionine-salvage pathway, where it is called 5-methylthioribulose-1-phosphate dehydratase (MtnB). The enzyme activity seems to be essential for inhibition of pyroptosis by APIP, but not for inhibition of apoptosis. In this study, human APIP was overproduced in Escherichia coli, purified and crystallized. An X-ray diffraction data set was collected to 2.40 Å resolution and the crystals belonged to space group C222(1), with unit-cell parameters a=106.61, b=107.50, c=189.76 Å. Given that four APIP molecules exist in the asymmetric unit, the Matthews coefficient is 2.70 Å3 Da(-1) and the corresponding solvent content is 54.4%.

摘要

已知凋亡蛋白酶激活因子-1相互作用蛋白(APIP)可抑制两种不同类型的细胞死亡:半胱天冬酶-1依赖性细胞焦亡和半胱天冬酶-9依赖性细胞凋亡。APIP还参与甲硫氨酸挽救途径,在该途径中它被称为5-甲基硫代核糖-1-磷酸脱水酶(MtnB)。酶活性似乎是APIP抑制细胞焦亡所必需的,但对抑制细胞凋亡并非必需。在本研究中,人APIP在大肠杆菌中过量表达、纯化并结晶。收集了分辨率为2.40 Å的X射线衍射数据集,晶体属于空间群C222(1),晶胞参数a = 106.61、b = 107.50、c = 189.76 Å。鉴于不对称单元中存在四个APIP分子,马修斯系数为2.70 Å3 Da-1,相应的溶剂含量为54.4%。

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