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一组 microRNA 基因的甲基化是膀胱癌检测的一种新型生物标志物。

Methylation of a panel of microRNA genes is a novel biomarker for detection of bladder cancer.

机构信息

Department of Urology, Sapporo Medical University, Sapporo, Japan.

出版信息

Eur Urol. 2013 Jun;63(6):1091-100. doi: 10.1016/j.eururo.2012.11.030. Epub 2012 Nov 23.

Abstract

BACKGROUND

Dysregulation of microRNAs (miRNAs) has been implicated in bladder cancer (BCa), although the mechanism is not fully understood.

OBJECTIVE

We aimed to explore the involvement of epigenetic alteration of miRNA expression in BCa.

DESIGN, SETTING, AND PARTICIPANTS: Two BCa cell lines (T24 and UM-UC-3) were treated with 5-aza-2'-deoxycytidine (5-aza-dC) and 4-phenylbutyric acid (PBA), after which their miRNA expression profiles were analyzed using a TaqMan array (Life Technologies, Carlsbad, CA, USA). Bisulfite pyrosequencing was used to assess miRNA gene methylation in 5 cancer cell lines, 83 primary tumors, and 120 preoperative and 47 postoperative urine samples.

OUTCOME MEASUREMENTS AND STATISTICAL ANALYSIS

Receiver operating characteristic (ROC) curve analysis was used to assess the diagnostic performance of the miRNA gene panel.

RESULTS AND LIMITATIONS

Of 664 miRNAs examined, 146 were upregulated by 5-aza-dC plus PBA. CpG islands were identified in the proximal upstream of 23 miRNA genes, and 12 of those were hypermethylated in cell lines. Among them, miR-137, miR-124-2, miR-124-3, and miR-9-3 were frequently and tumor-specifically methylated in primary cancers (miR-137: 68.7%; miR-124-2: 50.6%; miR-124-3: 65.1%; miR-9-3: 45.8%). Methylation of the same four miRNAs in urine specimens enabled BCa detection with 81% sensitivity and 89% specificity; the area under the ROC curve was 0.916. Ectopic expression of silenced miRNAs in BCa cells suppressed growth and cell invasion.

CONCLUSIONS

Our results indicate that epigenetic silencing of miRNA genes may be involved in the development of BCa and that methylation of miRNA genes could be a useful biomarker for cancer detection.

摘要

背景

微小 RNA(miRNA)的失调与膀胱癌(BCa)有关,尽管其机制尚不完全清楚。

目的

我们旨在探讨 miRNA 表达的表观遗传改变在 BCa 中的作用。

设计、地点和参与者:用 5-氮杂-2'-脱氧胞苷(5-aza-dC)和 4-苯基丁酸(PBA)处理 2 种 BCa 细胞系(T24 和 UM-UC-3),然后使用 TaqMan 阵列(Life Technologies,Carlsbad,CA,USA)分析它们的 miRNA 表达谱。亚硫酸氢盐焦磷酸测序用于评估 5 种癌细胞系、83 个原发性肿瘤以及 120 个术前和 47 个术后尿样中的 miRNA 基因甲基化。

测量和统计分析

使用接收器工作特征(ROC)曲线分析评估 miRNA 基因谱的诊断性能。

结果和局限性

在检查的 664 个 miRNA 中,有 146 个被 5-aza-dC 加 PBA 上调。在 23 个 miRNA 基因的近端上游鉴定出 CpG 岛,其中 12 个在细胞系中发生超甲基化。其中,miR-137、miR-124-2、miR-124-3 和 miR-9-3 在原发性癌症中频繁且肿瘤特异性地发生甲基化(miR-137:68.7%;miR-124-2:50.6%;miR-124-3:65.1%;miR-9-3:45.8%)。尿液标本中相同的 4 个 miRNA 的甲基化能够以 81%的敏感性和 89%的特异性检测到 BCa;ROC 曲线下面积为 0.916。沉默的 miRNA 在 BCa 细胞中的异位表达抑制了生长和细胞侵袭。

结论

我们的结果表明,miRNA 基因的表观遗传沉默可能参与了 BCa 的发生,并且 miRNA 基因的甲基化可能是癌症检测的有用生物标志物。

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