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新热带灵长类动物系统发育中的深分支时间顺序:来自线粒体基因组的见解。

Chronology of deep nodes in the neotropical primate phylogeny: insights from mitochondrial genomes.

机构信息

Departamento de Genética, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Rio de Janeiro, Brazil.

出版信息

PLoS One. 2012;7(12):e51699. doi: 10.1371/journal.pone.0051699. Epub 2012 Dec 14.

Abstract

The evolution of Neotropical Primates (NP) is permeated by factors associated with the pattern of diversification and the biogeography of the major lineages. These questions can be better understood by providing a robust estimate of the chronological scenario of NP evolution, a reason why molecular dating methods have been widely applied. One aspect of especial interest is the timing of diversification of the major NP lineages (pitheciids, atelids and cebids), which may have resulted from rapid episodes of adaptive radiation, a question that requires NP divergence time estimates with accurate statistical certainty. In this study, we evaluated the primate timescale focused on the age of nodes of NP radiation. We investigated the performance of complete primate mitochondrial genomes as traditional molecular markers of primate evolution and further including original mitochondrial data from the endangered muriqui, Brachyteles arachnoides (Accession No. JX262672). Comparisons of the age estimates at NP nodes based on mitochondrial genomes with those obtained from a nuclear supermatrix showed similar degrees of uncertainty. Further molecular data and more informative calibration priors are required for a more precise understanding of the early NP diversification.

摘要

新热带灵长类动物(NP)的进化受到与多样化模式和主要谱系生物地理学相关的因素的影响。通过提供 NP 进化的时间顺序的稳健估计,可以更好地理解这些问题,这也是分子年代测定方法得到广泛应用的原因。一个特别感兴趣的方面是主要 NP 谱系(悬猴、吼猴和松鼠猴)多样化的时间,这可能是由于快速的适应性辐射事件造成的,这个问题需要具有准确统计确定性的 NP 分歧时间估计。在这项研究中,我们评估了灵长类动物的时间尺度,重点是 NP 辐射节点的年龄。我们研究了完整的灵长类动物线粒体基因组作为灵长类动物进化的传统分子标记的性能,并进一步包括来自濒危的毛耳狨,Brachyteles arachnoides(登录号 JX262672)的原始线粒体数据。基于线粒体基因组的 NP 节点年龄估计与从核超级矩阵获得的年龄估计进行比较,显示出相似程度的不确定性。需要更多的分子数据和更具信息量的校准先验,以更精确地理解早期 NP 多样化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/019a/3522728/ca2e4d384c0a/pone.0051699.g001.jpg

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