Dept. of Animal Biotechnology, College of Veterinary Science & Animal Husbandry, Anand Agricultural University, Anand, Gujarat, 388001, India.
Biotechnol Prog. 2013 Mar-Apr;29(2):425-31. doi: 10.1002/btpr.1681. Epub 2013 Mar 1.
RNA interference represents one of the potential mechanisms of regulation of gene expression. Selective downregulation of myostatin (MSTN), a member of transforming growth factor-β (TGF-β) superfamily and a negative regulator of myogenesis, has been demonstrated to enhance skeletal muscle growth. In this study, we studied short hairpin RNA (shRNA)-induced myostatin gene silencing in chicken embryonic myoblast cells using seven different shRNA-expressing constructs by reverse transcription-quantitative real time PCR (RT-qPCR). Myostatin-silencing efficiency of all shRNA constructs were first evaluated in human embryonic kidney cell line 293T (HEK293T) cells, where we observed 30-75.6% reduction in myostatin expression, followed by chicken embryo myoblast cells that revealed up to 55% reduction in myostatin expression along with upregulation of MyoD by 4.65-folds. Consistent with the earlier observations, the transfection of cells with plasmids led to significant increase in interferon responsive genes OAS1 and IFN β (2-112-folds), independent of myostatin silencing in both HEK293T and chicken embryonic myoblast cells. Our study suggests that apart from shRNA sequences, cell type-specific factors may play a significant role in determining the knockdown efficiency of shRNAs.
RNA 干扰是基因表达调控的潜在机制之一。肌生成抑制素(MSTN)是转化生长因子-β(TGF-β)超家族的成员,也是肌生成的负调节剂,选择性下调肌生成抑制素已被证明可以增强骨骼肌生长。在这项研究中,我们通过逆转录定量实时 PCR(RT-qPCR)使用七种不同的 shRNA 表达构建体研究了鸡胚成肌细胞中短发夹 RNA(shRNA)诱导的肌生成抑制素基因沉默。我们首先在人胚肾细胞系 293T(HEK293T)细胞中评估了所有 shRNA 构建体的肌生成抑制素沉默效率,观察到肌生成抑制素表达降低 30-75.6%,随后在鸡胚成肌细胞中观察到肌生成抑制素表达降低高达 55%,同时 MyoD 上调 4.65 倍。与早期观察结果一致,转染细胞会导致干扰素反应基因 OAS1 和 IFN β(2-112 倍)显著增加,与 HEK293T 和鸡胚成肌细胞中的肌生成抑制素沉默无关。我们的研究表明,除了 shRNA 序列外,细胞类型特异性因素可能在确定 shRNA 的敲低效率方面发挥重要作用。