• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

有机溶剂中疏水性鸟嘌呤自组装的小角 X 射线散射研究:环己烷中环四聚体的形成和阳离子效应。

Small-angle X-ray scattering study of self-assembling lipophilic guanines in organic solvents: G-quadruplex formation and cation effects in cyclohexane.

机构信息

Dipartimento di Scienze della Vita e dell'Ambiente, Biophysics Research Group, Università Politecnica delle Marche, via Brecce Bianche, I-60131 Ancona, Italy.

出版信息

J Phys Chem B. 2013 Jan 31;117(4):1095-103. doi: 10.1021/jp3121929. Epub 2013 Jan 22.

DOI:10.1021/jp3121929
PMID:23294474
Abstract

Lipophilic guanilic derivatives (lipoGs) dissolved in organic solvents can undergo different self-assembly pathways based on different H-bonded motifs, e.g., the cyclic discrete G-quartet, which forms in the presence of alkali-metal ions, and the "infinite" tape-like G-ribbon observed in the absence of ions. Using in-solution small-angle X-ray scattering, we analyzed a series of lipoGs dissolved in cyclohexane in the presence of different salts. The formation of G-quartet based supramolecular aggregates has been confirmed, evidencing the coexistence equilibrium of octamers and noncovalent molecular nanowires (the so-called G-quadruplexes). By global fitting the scattering data, the concentration of the two kinds of particles as well as the nanowire length have been derived as a function of temperature for the different compounds and salts. The thermodynamic parameters show that the self-assembly aggregation process is enthalpy driven, while the observed enthalpy-entropy compensation suggests that similar stacking interactions control the self-assembly of the different compounds. However, the strength of the stacking interactions, and then the nanowire stability, depends on the nature of templating cations and on their capacity to fill the central cavity of quadruplexes, with the order Sr(+) < Na(+) ≲ K(+).

摘要

疏水性胍基衍生物(lipoGs)溶解在有机溶剂中可以根据不同的氢键模式经历不同的自组装途径,例如,在存在碱金属离子的情况下形成的环状离散 G-四聚体,以及在没有离子的情况下观察到的“无限”带状 G-带。使用溶液中的小角度 X 射线散射,我们分析了一系列溶解在环己烷中的 lipoGs 存在不同盐的情况。已经证实了基于 G-四聚体的超分子聚集体的形成,证明了八聚体和非共价分子纳米线(所谓的 G-四链体)共存平衡的存在。通过对散射数据进行全局拟合,我们推导出了不同化合物和盐在不同温度下两种粒子的浓度以及纳米线长度的函数。热力学参数表明,自组装聚集过程是由焓驱动的,而观察到的焓熵补偿表明,相似的堆积相互作用控制着不同化合物的自组装。然而,堆积相互作用的强度,然后是纳米线的稳定性,取决于模板阳离子的性质及其填充四链体中心腔的能力,顺序为 Sr(+) < Na(+) ≲ K(+)。

相似文献

1
Small-angle X-ray scattering study of self-assembling lipophilic guanines in organic solvents: G-quadruplex formation and cation effects in cyclohexane.有机溶剂中疏水性鸟嘌呤自组装的小角 X 射线散射研究:环己烷中环四聚体的形成和阳离子效应。
J Phys Chem B. 2013 Jan 31;117(4):1095-103. doi: 10.1021/jp3121929. Epub 2013 Jan 22.
2
Small angle X-ray scattering analysis of deoxyguanosine 5'-monophosphate self-assembing in solution: nucleation and growth of G-quadruplexes.溶液中5'-单磷酸脱氧鸟苷自组装的小角X射线散射分析:G-四链体的成核与生长
J Phys Chem B. 2009 Jun 4;113(22):7934-44. doi: 10.1021/jp809734p.
3
Metallo-responsive self-assembly of lipophilic guanines in hydrocarbon solvents: a systematic SAXS structural characterization.亲脂性鸟嘌呤在烃类溶剂中金属响应的自组装:系统的小角 X 射线散射结构表征。
Nanoscale. 2020 Jan 2;12(2):1022-1031. doi: 10.1039/c9nr08556d.
4
Quartet formation of a guanine derivative with an isopropyl group: crystal structures of "naked" G-quartets and thermodynamics of G-quartet formation.具有异丙基的鸟嘌呤衍生物的四聚体形成:“裸露”G-四聚体的晶体结构和 G-四聚体形成的热力学。
Org Biomol Chem. 2013 Feb 7;11(5):758-64. doi: 10.1039/c2ob26877a. Epub 2012 Dec 13.
5
Guanine-Based G-Quadruplexes Templated by Various Cations toward Potential Use as Single-Ion Conductors.基于鸟嘌呤的 G-四链体由各种阳离子模板化,有望用作单离子导体。
ChemSusChem. 2022 Feb 18;15(4):e202102201. doi: 10.1002/cssc.202102201. Epub 2022 Jan 20.
6
Monomer-dimer equilibrium for the 5'-5' stacking of propeller-type parallel-stranded G-quadruplexes: NMR structural study.发夹型平行股 G-四链体 5'-5' 堆积的单体-二聚体平衡:NMR 结构研究。
Chemistry. 2012 Nov 12;18(46):14752-9. doi: 10.1002/chem.201103295. Epub 2012 Sep 27.
7
Interaction of minor groove ligands with G-quadruplexes: thermodynamic contributions of the number of quartets, T-U substitutions, and conformation.小分子沟配体与 G-四链体的相互作用:四联体数量、T-U 取代和构象的热力学贡献。
Biochimie. 2011 Aug;93(8):1341-50. doi: 10.1016/j.biochi.2011.06.001. Epub 2011 Jun 12.
8
Unfolding of G-quadruplexes: energetic, and ion and water contributions of G-quartet stacking.G-四链体的解折叠:G-四重体堆积的能量、离子及水的作用
J Phys Chem B. 2006 Apr 6;110(13):6962-9. doi: 10.1021/jp0574697.
9
Cross-links of quadruplex structures from human telomeric DNA by dinuclear platinum complexes show the flexibility of both structures.双核铂配合物对人端粒DNA四链体结构的交联显示了两种结构的灵活性。
Biochemistry. 2005 Aug 9;44(31):10620-34. doi: 10.1021/bi050144w.
10
Structural diversity and extreme stability of unimolecular Oxytricha nova telomeric G-quadruplex.嗜热四膜虫单分子端粒G-四链体的结构多样性与极端稳定性
Biochemistry. 2008 Mar 18;47(11):3389-96. doi: 10.1021/bi702013d. Epub 2008 Feb 26.

引用本文的文献

1
K vs. Na Effects on the Self-Assembly of Guanosine 5'-Monophosphate: A Solution SAXS Structural Study.钾离子与钠离子对5'-磷酸鸟苷自组装的影响:溶液小角X射线散射结构研究
Nanomaterials (Basel). 2020 Mar 28;10(4):629. doi: 10.3390/nano10040629.
2
Thermodynamics of host-guest interactions between fullerenes and a buckycatcher.富勒烯与捕富勒烯剂之间主客体相互作用的热力学
J Phys Chem B. 2014 Oct 16;118(41):11956-64. doi: 10.1021/jp5087152. Epub 2014 Oct 6.
3
: software for the analysis of small-angle X-ray and neutron scattering data of macro-molecules in solution.
用于分析溶液中大分子的小角X射线和中子散射数据的软件。
J Appl Crystallogr. 2014 May 10;47(Pt 3):1132-1139. doi: 10.1107/S1600576714005147. eCollection 2014 Jun 1.