Institute for Cellular and Molecular Biology, Center for Systems and Synthetic Biology, and Section of Molecular Genetics and Microbiology, University of Texas at Austin, 1 University Station A4800, Austin, Texas 78712-0159, USA.
Nucleic Acids Res. 2013 Feb 1;41(4):2239-54. doi: 10.1093/nar/gks1452. Epub 2013 Jan 8.
The transition of mammalian cells from quiescence to proliferation is accompanied by the differential expression of several microRNAs (miRNAs) and transcription factors. However, the interplay between transcription factors and miRNAs in modulating gene regulatory networks involved in human cell proliferation is largely unknown. Here we show that the miRNA miR-22 promotes proliferation in primary human cells, and through a combination of Argonaute-2 immunoprecipitation and reporter assays, we identified multiple novel targets of miR-22, including several cell-cycle arrest genes that mediate the effects of the tumor-suppressor p53. In addition, we found that miR-22 suppresses interferon gene expression by directly targeting high mobility group box-1 and interferon regulatory factor (IRF)-5, preventing activation of IRF3 and NF-κB, which are activators of interferon genes. The expression of interferon genes is elevated in quiescent cells and their expression is inhibitory for cell proliferation. In addition, we find that miR-22 is activated by the transcription factor Myc when quiescent cells enter proliferation and that miR-22 inhibits the Myc transcriptional repressor MXD4, mediating a feed-forward loop to elevate Myc expression levels. Our results implicate miR-22 in downregulating the anti-proliferative p53 and interferon pathways and reveal a new transcription factor-miRNA network that regulates the transition of primary human cells from quiescence to proliferation.
哺乳动物细胞从静止期到增殖期的转变伴随着几种 microRNAs(miRNAs)和转录因子的差异表达。然而,转录因子和 miRNAs 在调节参与人类细胞增殖的基因调控网络中的相互作用在很大程度上是未知的。在这里,我们表明 miRNA miR-22 促进原代人细胞的增殖,并且通过 Argonaute-2 免疫沉淀和报告基因测定的组合,我们鉴定了 miR-22 的多个新靶标,包括几种细胞周期阻滞基因,这些基因介导肿瘤抑制因子 p53 的作用。此外,我们发现 miR-22 通过直接靶向高迁移率族盒 1 和干扰素调节因子 (IRF)-5 来抑制干扰素基因的表达,从而防止干扰素基因的激活因子 IRF3 和 NF-κB 的激活。干扰素基因在静止细胞中的表达上调,其表达对细胞增殖具有抑制作用。此外,我们发现 miR-22 在静止细胞进入增殖时被转录因子 Myc 激活,并且 miR-22 抑制 Myc 转录抑制因子 MXD4,介导正反馈回路以提高 Myc 表达水平。我们的结果表明 miR-22 参与下调抗增殖的 p53 和干扰素途径,并揭示了一个新的转录因子-miRNA 网络,该网络调节原代人细胞从静止期到增殖期的转变。