School of Nano-Bioscience and Chemical Engineering, Ulsan National Institute of Science and Technology, Republic of Korea.
J Am Chem Soc. 2013 Feb 13;135(6):2242-7. doi: 10.1021/ja3094923. Epub 2013 Feb 5.
This paper describes a system to study how small physical perturbations can affect bacterial community behavior in unexpected ways through modulation of diffusion and convective transport of chemical communication molecules and resources. A culture environment that mimics the chemically open characteristic of natural bacterial habitats but with user-defined spatiotemporal control of bacteria microcolonies is realized through use of an aqueous two phase system (ATPS). The ATPS is formulated with nontoxic dextran (DEX) and poly(ethylene glycol) (PEG) dissolved in cell culture media. DEX-phase droplets formed within a bulk PEG-phase stably confine the bacteria within it while small molecules diffuse relatively freely. Bacteria-containing DEX droplets can also be magnetically relocated, without loss of its bacterial content, when DEX-conjugated magnetic particles are included. We found that decreasing the distance between quorum-sensing (QS)-coupled microcolonies increased green fluorescent protein (GFP) expression due to increased inter-colony chemical communication but with upper limits. Periodic relocation of the chemical signal receiver colony, however, increased GFP expression beyond these typical bounds predicted by quorum sensing concepts alone by maintaining inter-colony chemical communication while also relieving the colony of short-range resource depletion effects. Computer simulations suggest that such increased productive output in response to periodic nonlethal physical perturbations is a common feature of chemically activated interactive cell systems where there is also a short-range inhibitory effect. In addition to providing insights on the effect of bacteria relocation, the magnetic ATPS droplet manipulation capability should be broadly useful for bioanalyses applications where selective partitioning at the microscale in fully aqueous conditions is needed.
本文描述了一个系统,通过调节化学通讯分子和资源的扩散和对流输运,研究微小的物理扰动如何以出人意料的方式影响细菌群落行为。通过使用双水相系统 (ATPS),实现了一种模拟自然细菌栖息地化学开放性特征但具有用户定义的细菌微菌落时空控制的培养环境。ATPS 由无毒的葡聚糖 (DEX) 和聚乙二醇 (PEG) 在细胞培养基中溶解形成。DEX 相液滴在大量的 PEG 相中形成,可稳定地将细菌限制在其中,而小分子则可相对自由地扩散。当包含 DEX 结合的磁性粒子时,含有细菌的 DEX 液滴也可以被磁性重新定位,而不会丢失其细菌内容物。我们发现,由于增加了菌群间的化学通讯,QS 耦合微菌落之间的距离减小会增加绿色荧光蛋白 (GFP) 的表达,但存在上限。然而,通过周期性地重新定位化学信号接收菌的菌落,可以在单独使用群体感应概念预测的典型界限之外增加 GFP 表达,因为它可以保持菌群间的化学通讯,同时也可以缓解菌落的短程资源耗尽效应。计算机模拟表明,这种对周期性非致命物理扰动的响应而增加的生产输出是化学激活的交互式细胞系统的共同特征,其中也存在短程抑制效应。除了提供关于细菌重定位影响的见解外,这种磁性 ATPS 液滴操纵能力应该在需要在完全水相条件下进行微尺度选择性分区的生物分析应用中具有广泛的用途。