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关于氢化酶的研究。

Studies on hydrogenase.

机构信息

Shizuoka University, Shizuoka, Japan.

出版信息

Proc Jpn Acad Ser B Phys Biol Sci. 2013;89(1):16-33. doi: 10.2183/pjab.89.16.

Abstract

Hydrogenases are microbial enzymes which catalyze uptake and production of H(2). Hydrogenases are classified into 10 classes based on the electron carrier specificity, or into 3 families, [NiFe]-family (including [NiFeSe]-subfamily), [FeFe]-family and [Fe]-family, based on the metal composition of the active site. H(2) is heterolytically cleaved on the enzyme (E) to produce EH(a)H(b), where H(a) and H(b) have different rate constants for exchange with the medium hydron. X-ray crystallography unveiled the three-dimensional structures of hydrogenases. The simplest [NiFe]-hydrogenase is a heterodimer, in which the large subunit bears the Ni-Fe center buried deep in the protein, and the small subunit bears iron-sulfur clusters, which mediate electron transfer between the Ni-Fe center and the protein surface. Some hydrogenases have additional subunit(s) for interaction with their electron carriers. Various redox states of the enzyme were characterized by EPR, FTIR, etc. Based on the kinetic, structural and spectroscopic studies, the catalytic mechanism of [NiFe]-hydrogenase was proposed to explain H(2)-uptake, H(2)-production and isotopic exchange reactions.(Communicated by Shigekazu NAGATA, M.J.A.).

摘要

氢化酶是一种微生物酶,能够催化 H(2)的摄取和产生。根据电子载体的特异性,氢化酶可分为 10 类,或者根据活性位点的金属组成,分为[NiFe]-家族(包括[NiFeSe]-亚家族)、[FeFe]-家族和[Fe]-家族。H(2)在酶(E)上发生异裂,生成 EH(a)H(b),其中 H(a)和 H(b)与介质中的氢的交换速率常数不同。X 射线晶体学揭示了氢化酶的三维结构。最简单的[NiFe]-氢化酶是一种杂二聚体,其中大亚基含有深埋在蛋白质中的 Ni-Fe 中心,而小亚基含有铁硫簇,这些簇介导 Ni-Fe 中心与蛋白质表面之间的电子转移。一些氢化酶具有额外的亚基(s)与它们的电子载体相互作用。通过 EPR、FTIR 等方法对酶的各种氧化还原态进行了表征。基于动力学、结构和光谱研究,提出了[NiFe]-氢化酶的催化机制,以解释 H(2)的摄取、H(2)的产生和同位素交换反应。(由 Shigekazu NAGATA,M.J.A. 传达)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c97f/3611953/7974313c9e35/pjab-89-016-g001.jpg

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