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基因体操:杆状病毒表达载体系统工程的合成生物学。

Gene gymnastics: Synthetic biology for baculovirus expression vector system engineering.

机构信息

European Molecular Biology Laboratory (EMBL); Grenoble Outstation and Unit of Virus Host-Cell Interactions (UVHCI); UJF-EMBL-CNRS, UMR 5233; Grenoble, France; Institut de Biologie Structurale (IBS); UMR5075 CEA-CNRS-Université Joseph Fourier; Grenoble, France; Information Services to Life Science (IStLS); Oberndorf am Neckar, Germany; Geneva Biotech; Geneva, Switzerland.

出版信息

Bioengineered. 2013 Sep-Oct;4(5):279-87. doi: 10.4161/bioe.22966. Epub 2013 Jan 17.

Abstract

Most essential activities in eukaryotic cells are catalyzed by large multiprotein assemblies containing up to ten or more interlocking subunits. The vast majority of these protein complexes are not easily accessible for high resolution studies aimed at unlocking their mechanisms, due to their low cellular abundance and high heterogeneity. Recombinant overproduction can resolve this bottleneck and baculovirus expression vector systems (BEVS) have emerged as particularly powerful tools for the provision of eukaryotic multiprotein complexes in high quality and quantity. Recently, synthetic biology approaches have begun to make their mark in improving existing BEVS reagents by de novo design of streamlined transfer plasmids and by engineering the baculovirus genome. Here we present OmniBac, comprising new custom designed reagents that further facilitate the integration of heterologous genes into the baculovirus genome for multiprotein expression. Based on comparative genome analysis and data mining, we herein present a blueprint to custom design and engineer the entire baculovirus genome for optimized production properties using a bottom-up synthetic biology approach.

摘要

真核细胞中的大多数基本活动都是由包含多达十个或更多相互扣合的亚基的大型多蛋白组装体催化的。由于这些蛋白质复合物在细胞中的丰度低且异质性高,因此绝大多数都不容易进行旨在揭示其机制的高分辨率研究。重组过表达可以解决这个瓶颈,杆状病毒表达载体系统 (BEVS) 已成为提供高质量和数量的真核多蛋白复合物的特别强大的工具。最近,合成生物学方法开始通过从头设计简化的转移质粒和工程化杆状病毒基因组来改进现有的 BEVS 试剂。在这里,我们提出了 OmniBac,它包含了新的定制设计的试剂,进一步促进了异源基因整合到杆状病毒基因组中进行多蛋白表达。基于比较基因组分析和数据挖掘,我们在此提出了一个蓝图,用于使用自下而上的合成生物学方法来定制设计和工程化整个杆状病毒基因组,以优化生产特性。

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本文引用的文献

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MultiBac turns sweet.多角体变得甜美。
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MultiBac complexomics.多杆状病毒复合物组学。
Expert Rev Proteomics. 2012 Aug;9(4):363-73. doi: 10.1586/epr.12.32.
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High-throughput baculovirus expression in insect cells.昆虫细胞中的高通量杆状病毒表达
Methods Mol Biol. 2012;824:609-27. doi: 10.1007/978-1-61779-433-9_33.
5
MultiBac: expanding the research toolbox for multiprotein complexes.MultiBac:扩展多蛋白复合物研究工具包。
Trends Biochem Sci. 2012 Feb;37(2):49-57. doi: 10.1016/j.tibs.2011.10.005. Epub 2011 Dec 7.
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Getting a grip on complexes.把握复杂性。
Curr Genomics. 2009 Dec;10(8):558-72. doi: 10.2174/138920209789503923.

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