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中性和氧化还原腺嘌呤的优势和稀有互变异构体的量子化学研究。

Quantum-chemical studies on the favored and rare tautomers of neutral and redox adenine.

机构信息

Department of Chemistry, Warsaw University of Life Sciences (SGGW), ul. Nowoursynowska 159 c, 02-776 Warszawa, Poland.

出版信息

J Phys Chem A. 2013 Feb 21;117(7):1548-59. doi: 10.1021/jp3081029. Epub 2013 Feb 5.

Abstract

All possible twenty-three prototropic tautomers of neutral and redox adenine (nine amine and fourteen imine forms, including geometric isomerism of the exo ═NH group) were examined in vacuo {DFT(B3LYP)/6-311+G(d,p)}. The NH → NH conversions as well as those usually omitted, NH → CH and CH → CH, were considered. An interesting change of the tautomeric preference occurs when proceeding from neutral to reduced adenine. One-electron reduction favors the nonaromatic amine C8H-N10H tautomer. This tautomeric preference is similar to that (C2H) for reduced imidazole. Water molecules (PCM model) seem to not change this trend. They influence solely the relative energies. The DFT vertical detachment energy in the gas phase is positive for each tautomer, e.g., 0.03 eV for N9H-N10H and 1.84 eV for C8H-N10H. The DFT adiabatic electron affinity for the favored process, neutral N9H-N10H → reduced C8H-N10H (ground states), is equal to 0.18 eV at 0 K (ZPE included). One-electron oxidation does not change the tautomeric preference in the gas phase. The aromatic amine N9H-N10H tautomer is favored for the oxidized molecule similarly as for the neutral one. The DFT adiabatic ionization potential for the favored process, neutral N9H-N10H → oxidized N9H-N10H (ground states), is equal to 8.12 eV at 0 K (ZPE included). Water molecules (PCM model) seem to influence solely the composition of the tautomeric mixture and the relative energies. They change the energies of the oxidation and reduction processes by ca. 2 eV.

摘要

在真空条件下,使用 DFT(B3LYP)/6-311+G(dp)方法对中性和氧化还原腺嘌呤的所有可能的 23 个互变异构体(9 种胺和 14 种亚胺形式,包括外 ═NH 基团的几何异构体)进行了研究。考虑了 NH → NH 转化以及通常被忽略的 NH → CH 和 CH → CH 转化。当从中性腺嘌呤向还原腺嘌呤进行时,互变异构体的偏好会发生有趣的变化。单电子还原有利于非芳香胺 C8H-N10H 互变异构体。这种互变异构体的偏好类似于还原咪唑的(C2H)。水分子(PCM 模型)似乎不会改变这种趋势。它们仅影响相对能量。气相中的 DFT 垂直离解能对于每个互变异构体均为正值,例如,N9H-N10H 为 0.03 eV,C8H-N10H 为 1.84 eV。对于有利过程(中性 N9H-N10H → 还原 C8H-N10H(基态)),DFT 绝热电子亲合势在 0 K(包括 ZPE)时等于 0.18 eV。在气相中单电子氧化不会改变互变异构体的偏好。芳香胺 N9H-N10H 互变异构体对于氧化分子与中性分子同样有利。对于有利过程(中性 N9H-N10H → 氧化 N9H-N10H(基态)),DFT 绝热电离势在 0 K(包括 ZPE)时等于 8.12 eV。水分子(PCM 模型)似乎仅影响互变异构体混合物的组成和相对能量。它们使氧化和还原过程的能量变化约为 2 eV。

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