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生物回路中矛盾组件的实用性。

The utility of paradoxical components in biological circuits.

机构信息

Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot 76100, Israel.

出版信息

Mol Cell. 2013 Jan 24;49(2):213-21. doi: 10.1016/j.molcel.2013.01.004.

Abstract

A recurring theme in biological circuits is the existence of components that are antagonistically bifunctional, in the sense that they simultaneously have two opposing effects on the same target or biological process. Examples include bifunctional enzymes that carry out two opposing reactions such as phosphorylating and dephosphorylating the same target, regulators that activate and also repress a gene in circuits called incoherent feedforward loops, and cytokines that signal immune cells to both proliferate and die. Such components are termed "paradoxical", and in this review we discuss how they can provide useful features to cell circuits that are otherwise difficult to achieve. In particular, we summarize how paradoxical components can provide robustness, generate temporal pulses, and provide fold-change detection, in which circuits respond to relative rather than absolute changes in signals.

摘要

在生物回路中,一个反复出现的主题是存在具有拮抗双功能的元件,从某种意义上说,它们同时对同一靶标或生物过程具有两种相反的影响。例如,双功能酶可以进行两种相反的反应,如磷酸化和去磷酸化同一靶标,调节因子可以在称为非相干前馈环的回路中激活和抑制基因,细胞因子可以向免疫细胞发出增殖和死亡的信号。这些元件被称为“矛盾的”,在这篇综述中,我们讨论了它们如何为细胞回路提供有用的特性,而这些特性在其他情况下很难实现。特别是,我们总结了矛盾元件如何提供鲁棒性、产生时间脉冲以及提供折叠变化检测,其中电路响应的是信号的相对变化而不是绝对变化。

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